RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 MIR1-1HGQ9H1L0 117 aa6.82□□□□□ -1.32
SCFD1-214ENST00000554819 C7orf69Q9H7B7 122 aa6.82□□□□□ -1.32
SCFD1-214ENST00000554819 FAM105AQ9NUU6 356 aa6.82□□□□□ -1.32
SCFD1-214ENST00000554819 HMX2A2RU54 273 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 FSTP19883 344 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 PRSS36Q5K4E3 855 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 HS2ST1Q7LGA3 356 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 ACSS3Q9H6R3 686 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 DISC1Q9NRI5 854 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 SNCAIPQ9Y6H5 919 aa6.81□□□□□ -1.32
SCFD1-214ENST00000554819 IGLV1-40P01703 118 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 NFICP08651 508 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 RAB6AP20340 208 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 GBP2P32456 591 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-214ENST00000554819 NFIAQ12857 509 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 TSNAXIP1Q2TAA8 658 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 RNF43Q68DV7 783 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 HDXQ7Z353 690 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 CCDC84Q86UT8 332 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-214ENST00000554819 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 PHC3Q8NDX5 983 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 GIMAP7Q8NHV1 300 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 MRRFQ96E11 262 aaKnown RBP6.8□□□□□ -1.32
SCFD1-214ENST00000554819 TMEM74Q96NL1 305 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 PICK1Q9NRD5 415 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 TLR6Q9Y2C9 796 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 PCDHB5Q9Y5E4 795 aa6.8□□□□□ -1.32
SCFD1-214ENST00000554819 RNGTTO60942 597 aaKnown RBP6.79□□□□□ -1.32
SCFD1-214ENST00000554819 TFE3P19532 575 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-214ENST00000554819 LMNB2Q03252 620 aa6.79□□□□□ -1.32
SCFD1-214ENST00000554819 TTLL4Q14679 1199 aa6.79□□□□□ -1.32
SCFD1-214ENST00000554819 SMYD4Q8IYR2 804 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-214ENST00000554819 GAL3ST3Q96A11 431 aa6.79□□□□□ -1.32
SCFD1-214ENST00000554819 DBNDD2Q9BQY9 259 aa6.79□□□□□ -1.32
SCFD1-214ENST00000554819 SEMA6CQ9H3T2 930 aa6.79□□□□□ -1.32
SCFD1-214ENST00000554819 SSU72Q9NP77 194 aaKnown RBP6.79□□□□□ -1.32
SCFD1-214ENST00000554819 METTL5Q9NRN9 209 aaKnown RBP6.79□□□□□ -1.32
SCFD1-214ENST00000554819 GGT7Q9UJ14 662 aa6.79□□□□□ -1.32
SCFD1-214ENST00000554819 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
SCFD1-214ENST00000554819 DCDC2CA8MYV0 355 aa6.78□□□□□ -1.32
SCFD1-214ENST00000554819 FANCGO15287 622 aa6.78□□□□□ -1.32
SCFD1-214ENST00000554819 ZNF76P36508 570 aa6.78□□□□□ -1.32
SCFD1-214ENST00000554819 PTPN11Q06124 597 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-214ENST00000554819 CAMK2GQ13555 558 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-214ENST00000554819 SEPT6Q14141 434 aa6.78□□□□□ -1.32
SCFD1-214ENST00000554819 ERMP1Q7Z2K6 904 aa6.78□□□□□ -1.32
SCFD1-214ENST00000554819 C12orf40Q86WS4 652 aa6.78□□□□□ -1.32
SCFD1-214ENST00000554819 DAGLAQ9Y4D2 1042 aa6.78□□□□□ -1.32
SCFD1-214ENST00000554819 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 SCAMP3O14828 347 aaKnown RBP6.77□□□□□ -1.33
SCFD1-214ENST00000554819 PF4P02776 101 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-214ENST00000554819 RING1Q06587 406 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 INPP5AQ14642 412 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 PPM1JQ5JR12 505 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 LDLRAD1Q5T700 205 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 CDC37L1Q7L3B6 337 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 KCT2Q8NC54 265 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 JARID2Q92833 1246 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-214ENST00000554819 KBTBD4Q9NVX7 518 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 CSADQ9Y600 493 aa6.77□□□□□ -1.33
SCFD1-214ENST00000554819 F6X3S4 739 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 BPNT1O95861 308 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
SCFD1-214ENST00000554819 LRFN4Q6PJG9 635 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 CYFIP1Q7L576 1253 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCFD1-214ENST00000554819 ZNF507Q8TCN5 953 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 RNF34Q969K3 372 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 PLPPR2Q96GM1 343 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 RHOVQ96L33 236 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 TBC1D32Q96NH3 1257 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 PRKAG2Q9UGJ0 569 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 TACC3Q9Y6A5 838 aa6.76□□□□□ -1.33
SCFD1-214ENST00000554819 UNCXA6NJT0 531 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 RECKO95980 971 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 WIPI1Q5MNZ9 446 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-214ENST00000554819 SNAP47Q5SQN1 464 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 ZBTB37Q5TC79 503 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 SEZ6L2Q6UXD5 910 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-214ENST00000554819 GATAD2BQ8WXI9 593 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 MFSD14AQ96MC6 490 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 LGR6Q9HBX8 967 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 ATG3Q9NT62 314 aa6.75□□□□□ -1.33
SCFD1-214ENST00000554819 ROBO2Q9HCK4 1378 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 PRAMEF27A3QJZ7 478 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 GFRA2O00451 464 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 NEFMP07197 916 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 ITGB7P26010 798 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 EIF4A3P38919 411 aaKnown RBP6.74□□□□□ -1.33
SCFD1-214ENST00000554819 FANCCQ00597 558 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 CYP27A1Q02318 531 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 CPSF6Q16630 551 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCFD1-214ENST00000554819 ZAR1Q86SH2 424 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 GOLM1Q8NBJ4 401 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 ISL2Q96A47 359 aa6.74□□□□□ -1.33
SCFD1-214ENST00000554819 METTL22Q9BUU2 404 aaPredicted RBP6.74□□□□□ -1.33
SCFD1-214ENST00000554819 WNT10AQ9GZT5 417 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms