RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CCDC7Q96M83 1385 aa8.28□□□□□ -1.08
ATXN3-226ENST00000554350 A6NJR5 290 aa8.28□□□□□ -1.08
ATXN3-226ENST00000554350 FAM196BA6NMK8 535 aa8.28□□□□□ -1.08
ATXN3-226ENST00000554350 IGFBP4P22692 258 aa8.28□□□□□ -1.08
ATXN3-226ENST00000554350 GRIK4Q16099 956 aa8.28□□□□□ -1.08
ATXN3-226ENST00000554350 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
ATXN3-226ENST00000554350 DDX54Q8TDD1 881 aaKnown RBP8.28□□□□□ -1.08
ATXN3-226ENST00000554350 RNF181Q9P0P0 153 aa8.28□□□□□ -1.08
ATXN3-226ENST00000554350 POLR3AO14802 1390 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-226ENST00000554350 RGS19P49795 217 aa8.27□□□□□ -1.09
ATXN3-226ENST00000554350 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-226ENST00000554350 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-226ENST00000554350 ANKMY2Q8IV38 441 aa8.27□□□□□ -1.09
ATXN3-226ENST00000554350 FLAD1Q8NFF5 587 aa8.27□□□□□ -1.09
ATXN3-226ENST00000554350 HINFPQ9BQA5 517 aa8.27□□□□□ -1.09
ATXN3-226ENST00000554350 NLRP2Q9NX02 1062 aa8.27□□□□□ -1.09
ATXN3-226ENST00000554350 DNAJB12Q9NXW2 375 aaKnown RBP8.27□□□□□ -1.09
ATXN3-226ENST00000554350 A0A0G2JLW4 131 aa8.26□□□□□ -1.09
ATXN3-226ENST00000554350 LILRB5O75023 590 aa8.26□□□□□ -1.09
ATXN3-226ENST00000554350 IL2RBP14784 551 aa8.26□□□□□ -1.09
ATXN3-226ENST00000554350 TRIM28Q13263 835 aaKnown RBP8.26□□□□□ -1.09
ATXN3-226ENST00000554350 HIF1AQ16665 826 aa8.26□□□□□ -1.09
ATXN3-226ENST00000554350 CALR3Q96L12 384 aaKnown RBP8.26□□□□□ -1.09
ATXN3-226ENST00000554350 CDK19Q9BWU1 502 aa8.26□□□□□ -1.09
ATXN3-226ENST00000554350 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
ATXN3-226ENST00000554350 EFCC1Q9HA90 598 aa8.26□□□□□ -1.09
ATXN3-226ENST00000554350 CPSF1Q10570 1443 aaKnown RBP8.26□□□□□ -1.09
ATXN3-226ENST00000554350 C10orf71Q711Q0 1435 aa8.26□□□□□ -1.09
ATXN3-226ENST00000554350 RGPD5Q99666 1765 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 TNRC6CQ9HCJ0 1690 aaKnown RBP8.25□□□□□ -1.09
ATXN3-226ENST00000554350 SELPP16109 830 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 NFKB1P19838 968 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 WEE1P30291 646 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 INPP5BP32019 993 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 TBC1D8BQ0IIM8 1120 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 SMIM5Q71RC9 77 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 KLK14Q9P0G3 267 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 SPATA31E1Q6ZUB1 1445 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 PDE4DIPQ5VU43 2346 aa8.25□□□□□ -1.09
ATXN3-226ENST00000554350 PKD1L3Q7Z443 1732 aa8.24□□□□□ -1.09
ATXN3-226ENST00000554350 A0A0A0MRY4 1105 aa8.24□□□□□ -1.09
ATXN3-226ENST00000554350 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-226ENST00000554350 AFF1P51825 1210 aaKnown RBP8.24□□□□□ -1.09
ATXN3-226ENST00000554350 CCINQ13939 588 aa8.24□□□□□ -1.09
ATXN3-226ENST00000554350 NUDT8Q8WV74 236 aa8.24□□□□□ -1.09
ATXN3-226ENST00000554350 IGFLR1Q9H665 355 aa8.24□□□□□ -1.09
ATXN3-226ENST00000554350 ZFATQ9P243 1243 aa8.24□□□□□ -1.09
ATXN3-226ENST00000554350 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-226ENST00000554350 COL18A1P39060 1754 aa8.24□□□□□ -1.09
ATXN3-226ENST00000554350 DYRK3O43781 588 aa8.23□□□□□ -1.09
ATXN3-226ENST00000554350 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
ATXN3-226ENST00000554350 VEGFAP15692 232 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-226ENST00000554350 ADGRE1Q14246 886 aa8.23□□□□□ -1.09
ATXN3-226ENST00000554350 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
ATXN3-226ENST00000554350 PSAPL1Q6NUJ1 521 aa8.23□□□□□ -1.09
ATXN3-226ENST00000554350 VRTNQ9H8Y1 702 aa8.23□□□□□ -1.09
ATXN3-226ENST00000554350 JPH1Q9HDC5 661 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-226ENST00000554350 PXDNLA1KZ92 1463 aa8.23□□□□□ -1.09
ATXN3-226ENST00000554350 USP47Q96K76 1375 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 N4BP2Q86UW6 1770 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-226ENST00000554350 LOC105371045A0A1W2PR82 267 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 ZBTB42B2RXF5 422 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 IDH3AP50213 366 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 MBTPS1Q14703 1052 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 GRIK5Q16478 980 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 SHISA2Q6UWI4 295 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 ARHGEF25Q86VW2 580 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 NACC1Q96RE7 527 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 SLIT3O75094 1523 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 CNTNAP1P78357 1384 aa8.22□□□□□ -1.09
ATXN3-226ENST00000554350 LY75O60449 1722 aa8.21□□□□□ -1.09
ATXN3-226ENST00000554350 MAP3K6O95382 1288 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 ELNP15502 786 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 DPEP1P16444 411 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 TGFB2P61812 414 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 PLAURQ03405 335 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 DGKZQ13574 1117 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 MYO19Q96H55 970 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 ANKRD36BQ8N2N9 1353 aa8.21□□□□□ -1.1
ATXN3-226ENST00000554350 MMP10P09238 476 aa8.2□□□□□ -1.1
ATXN3-226ENST00000554350 SRPK2P78362 688 aaKnown RBP8.2□□□□□ -1.1
ATXN3-226ENST00000554350 ZMYM1Q5SVZ6 1142 aa8.2□□□□□ -1.1
ATXN3-226ENST00000554350 KCNH5Q8NCM2 988 aa8.2□□□□□ -1.1
ATXN3-226ENST00000554350 IFT43Q96FT9 208 aa8.2□□□□□ -1.1
ATXN3-226ENST00000554350 LPIN3Q9BQK8 851 aa8.2□□□□□ -1.1
ATXN3-226ENST00000554350 LRFN2Q9ULH4 789 aa8.2□□□□□ -1.1
ATXN3-226ENST00000554350 C5P01031 1676 aa8.19□□□□□ -1.1
ATXN3-226ENST00000554350 OPLAHO14841 1288 aa8.19□□□□□ -1.1
ATXN3-226ENST00000554350 FMR1NBQ8N0W7 255 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-226ENST00000554350 LENG1Q96BZ8 264 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-226ENST00000554350 PNMA5Q96PV4 448 aa8.19□□□□□ -1.1
ATXN3-226ENST00000554350 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
ATXN3-226ENST00000554350 DOT1LQ8TEK3 1739 aa8.19□□□□□ -1.1
ATXN3-226ENST00000554350 ADGRB1O14514 1584 aa8.18□□□□□ -1.1
ATXN3-226ENST00000554350 USP54Q70EL1 1684 aa8.18□□□□□ -1.1
ATXN3-226ENST00000554350 C9orf172C9J069 976 aa8.18□□□□□ -1.1
ATXN3-226ENST00000554350 MICAL2O94851 1124 aa8.18□□□□□ -1.1
ATXN3-226ENST00000554350 HMGB2P26583 209 aaKnown RBP8.18□□□□□ -1.1
ATXN3-226ENST00000554350 TARSP26639 723 aaKnown RBP8.18□□□□□ -1.1
ATXN3-226ENST00000554350 ARSDP51689 593 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms