RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
NEDD1-206ENST00000554226 INHAP05111 366 aa17.4■□□□□ 0.38
NEDD1-206ENST00000554226 FLT3LGP49771 235 aa17.4■□□□□ 0.38
NEDD1-206ENST00000554226 MAP3K10Q02779 954 aa17.4■□□□□ 0.38
NEDD1-206ENST00000554226 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
NEDD1-206ENST00000554226 DEFB118Q96PH6 123 aa17.4■□□□□ 0.38
NEDD1-206ENST00000554226 TFRCP02786 760 aaKnown RBP17.39■□□□□ 0.37
NEDD1-206ENST00000554226 ELNP15502 786 aa17.39■□□□□ 0.37
NEDD1-206ENST00000554226 SCYL3Q8IZE3 742 aa17.39■□□□□ 0.37
NEDD1-206ENST00000554226 DEFB123Q8N688 67 aa17.39■□□□□ 0.37
NEDD1-206ENST00000554226 STXBP5LQ9Y2K9 1186 aa17.39■□□□□ 0.37
NEDD1-206ENST00000554226 AFG3L2Q9Y4W6 797 aa17.39■□□□□ 0.37
NEDD1-206ENST00000554226 SALL1Q9NSC2 1324 aa17.39■□□□□ 0.37
NEDD1-206ENST00000554226 PTPRAP18433 802 aa17.38■□□□□ 0.37
NEDD1-206ENST00000554226 TCP10Q12799 353 aa17.38■□□□□ 0.37
NEDD1-206ENST00000554226 ANKLE1Q8NAG6 615 aa17.38■□□□□ 0.37
NEDD1-206ENST00000554226 LPIN2Q92539 896 aa17.38■□□□□ 0.37
NEDD1-206ENST00000554226 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
NEDD1-206ENST00000554226 IDI2Q9BXS1 227 aa17.38■□□□□ 0.37
NEDD1-206ENST00000554226 SPINK5Q9NQ38 1064 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-206ENST00000554226 MYH2Q9UKX2 1941 aa17.38■□□□□ 0.37
NEDD1-206ENST00000554226 LOC285556D6RIA3 1793 aa17.38■□□□□ 0.37
NEDD1-206ENST00000554226 TNPO2O14787 897 aaKnown RBP17.37■□□□□ 0.37
NEDD1-206ENST00000554226 ENTPD3O75355 529 aa17.37■□□□□ 0.37
NEDD1-206ENST00000554226 DIXDC1Q155Q3 683 aa17.37■□□□□ 0.37
NEDD1-206ENST00000554226 LRIT3Q3SXY7 679 aa17.37■□□□□ 0.37
NEDD1-206ENST00000554226 ZHX2Q9Y6X8 837 aa17.37■□□□□ 0.37
NEDD1-206ENST00000554226 SLC5A1P13866 664 aa17.36■□□□□ 0.37
NEDD1-206ENST00000554226 PRDX5P30044 214 aa17.36■□□□□ 0.37
NEDD1-206ENST00000554226 Q7L0L9 218 aa17.36■□□□□ 0.37
NEDD1-206ENST00000554226 NECAB2Q7Z6G3 386 aa17.36■□□□□ 0.37
NEDD1-206ENST00000554226 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
NEDD1-206ENST00000554226 DIS3LQ8TF46 1054 aaKnown RBP17.36■□□□□ 0.37
NEDD1-206ENST00000554226 PICK1Q9NRD5 415 aa17.36■□□□□ 0.37
NEDD1-206ENST00000554226 EYA2O00167 538 aa17.35■□□□□ 0.37
NEDD1-206ENST00000554226 SEMA3EO15041 775 aa17.35■□□□□ 0.37
NEDD1-206ENST00000554226 RFX5P48382 616 aaPredicted RBP17.35■□□□□ 0.37
NEDD1-206ENST00000554226 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
NEDD1-206ENST00000554226 USP40Q9NVE5 1235 aa17.35■□□□□ 0.37
NEDD1-206ENST00000554226 MTMR10Q9NXD2 777 aa17.35■□□□□ 0.37
NEDD1-206ENST00000554226 GAKO14976 1311 aa17.35■□□□□ 0.37
NEDD1-206ENST00000554226 UNC80Q8N2C7 3258 aa17.35■□□□□ 0.37
NEDD1-206ENST00000554226 CTNND1O60716 968 aaKnown RBP17.34■□□□□ 0.37
NEDD1-206ENST00000554226 LDHBP07195 334 aaKnown RBP17.34■□□□□ 0.37
NEDD1-206ENST00000554226 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
NEDD1-206ENST00000554226 DDX60LQ5H9U9 1706 aaKnown RBP17.34■□□□□ 0.37
NEDD1-206ENST00000554226 C7orf61Q8IZ16 206 aa17.34■□□□□ 0.37
NEDD1-206ENST00000554226 SMCR8Q8TEV9 937 aaPredicted RBP17.34■□□□□ 0.37
NEDD1-206ENST00000554226 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
NEDD1-206ENST00000554226 ZMYND8Q9ULU4 1186 aaPredicted RBP17.34■□□□□ 0.37
NEDD1-206ENST00000554226 AGTPBP1Q9UPW5 1226 aa17.34■□□□□ 0.37
NEDD1-206ENST00000554226 PTPRCP08575 1304 aa17.33■□□□□ 0.36
NEDD1-206ENST00000554226 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
NEDD1-206ENST00000554226 SH3BP5LQ7L8J4 393 aa17.33■□□□□ 0.36
NEDD1-206ENST00000554226 ATG9AQ7Z3C6 839 aa17.33■□□□□ 0.36
NEDD1-206ENST00000554226 COA7Q96BR5 231 aa17.33■□□□□ 0.36
NEDD1-206ENST00000554226 COL25A1Q9BXS0 654 aaPredicted RBP17.33■□□□□ 0.36
NEDD1-206ENST00000554226 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.33■□□□□ 0.36
NEDD1-206ENST00000554226 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
NEDD1-206ENST00000554226 PLXNB2O15031 1838 aa17.33■□□□□ 0.36
NEDD1-206ENST00000554226 RGS3P49796 1198 aa17.32■□□□□ 0.36
NEDD1-206ENST00000554226 GADL1Q6ZQY3 521 aa17.32■□□□□ 0.36
NEDD1-206ENST00000554226 TDHQ8IZJ6 230 aa17.32■□□□□ 0.36
NEDD1-206ENST00000554226 FAM163AQ96GL9 167 aaPredicted RBP17.32■□□□□ 0.36
NEDD1-206ENST00000554226 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
NEDD1-206ENST00000554226 PDS5AQ29RF7 1337 aaKnown RBP17.31■□□□□ 0.36
NEDD1-206ENST00000554226 CIAO1O76071 339 aa17.31■□□□□ 0.36
NEDD1-206ENST00000554226 HMGCRP04035 888 aa17.31■□□□□ 0.36
NEDD1-206ENST00000554226 MAGEA10P43363 369 aaPredicted RBP17.31■□□□□ 0.36
NEDD1-206ENST00000554226 PROCA1Q8NCQ7 364 aaPredicted RBP17.31■□□□□ 0.36
NEDD1-206ENST00000554226 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
NEDD1-206ENST00000554226 PNMA3Q9UL41 463 aa17.31■□□□□ 0.36
NEDD1-206ENST00000554226 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
NEDD1-206ENST00000554226 RPTORQ8N122 1335 aa17.3■□□□□ 0.36
NEDD1-206ENST00000554226 TBC1D12O60347 775 aa17.3■□□□□ 0.36
NEDD1-206ENST00000554226 NPM3O75607 178 aaKnown RBP17.3■□□□□ 0.36
NEDD1-206ENST00000554226 GCLCP48506 637 aaPredicted RBP17.3■□□□□ 0.36
NEDD1-206ENST00000554226 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
NEDD1-206ENST00000554226 ANKRD13CQ8N6S4 541 aa17.3■□□□□ 0.36
NEDD1-206ENST00000554226 NBPF3Q9H094 633 aa17.3■□□□□ 0.36
NEDD1-206ENST00000554226 TAOK2Q9UL54 1235 aa17.3■□□□□ 0.36
NEDD1-206ENST00000554226 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
NEDD1-206ENST00000554226 LRRFIP2Q9Y608 721 aaKnown RBP17.3■□□□□ 0.36
NEDD1-206ENST00000554226 DDTLA6NHG4 134 aaPredicted RBP17.29■□□□□ 0.36
NEDD1-206ENST00000554226 SYN1P17600 705 aa17.29■□□□□ 0.36
NEDD1-206ENST00000554226 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
NEDD1-206ENST00000554226 MRPL50Q8N5N7 158 aaKnown RBP17.29■□□□□ 0.36
NEDD1-206ENST00000554226 TBC1D2Q9BYX2 928 aa17.29■□□□□ 0.36
NEDD1-206ENST00000554226 GJD2Q9UKL4 321 aa17.29■□□□□ 0.36
NEDD1-206ENST00000554226 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
NEDD1-206ENST00000554226 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
NEDD1-206ENST00000554226 TREML2Q5T2D2 321 aa17.28■□□□□ 0.36
NEDD1-206ENST00000554226 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
NEDD1-206ENST00000554226 OGDHLQ9ULD0 1010 aa17.28■□□□□ 0.36
NEDD1-206ENST00000554226 MAP3K21Q5TCX8 1036 aa17.27■□□□□ 0.36
NEDD1-206ENST00000554226 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.27■□□□□ 0.36
NEDD1-206ENST00000554226 SLF2Q8IX21 1173 aa17.27■□□□□ 0.36
NEDD1-206ENST00000554226 C11orf49Q9H6J7 331 aa17.27■□□□□ 0.36
NEDD1-206ENST00000554226 HMX1Q9NP08 348 aaPredicted RBP17.27■□□□□ 0.36
NEDD1-206ENST00000554226 DDX4Q9NQI0 724 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms