RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 SH3BP5LQ7L8J4 393 aa22.16■■□□□ 1.14
PSEN1-210ENST00000554131 USP48Q86UV5 1035 aa22.16■■□□□ 1.14
PSEN1-210ENST00000554131 CDAN1Q8IWY9 1227 aa22.16■■□□□ 1.14
PSEN1-210ENST00000554131 FAM151AQ8WW52 585 aa22.16■■□□□ 1.14
PSEN1-210ENST00000554131 TMOD2Q9NZR1 351 aa22.16■■□□□ 1.14
PSEN1-210ENST00000554131 SSC5DA1L4H1 1573 aa22.16■■□□□ 1.14
PSEN1-210ENST00000554131 ATRNL1Q5VV63 1379 aa22.15■■□□□ 1.14
PSEN1-210ENST00000554131 TNFAIP1Q13829 316 aa22.15■■□□□ 1.14
PSEN1-210ENST00000554131 SULF1Q8IWU6 871 aa22.15■■□□□ 1.14
PSEN1-210ENST00000554131 SDR42E1Q8WUS8 393 aa22.15■■□□□ 1.14
PSEN1-210ENST00000554131 CRNKL1Q9BZJ0 848 aaKnown RBP22.15■■□□□ 1.14
PSEN1-210ENST00000554131 TMEM39BQ9GZU3 492 aa22.15■■□□□ 1.14
PSEN1-210ENST00000554131 PPP2R3BQ9Y5P8 575 aa22.15■■□□□ 1.14
PSEN1-210ENST00000554131 MYH1P12882 1939 aa22.15■■□□□ 1.14
PSEN1-210ENST00000554131 BAZ2AQ9UIF9 1905 aaKnown RBP22.14■■□□□ 1.14
PSEN1-210ENST00000554131 GSG1L2A8MUP6 293 aa22.14■■□□□ 1.13
PSEN1-210ENST00000554131 TRAF5O00463 557 aa22.14■■□□□ 1.13
PSEN1-210ENST00000554131 FMR1Q06787 632 aaKnown RBP eCLIP22.14■■□□□ 1.13
PSEN1-210ENST00000554131 TCP10Q12799 353 aa22.14■■□□□ 1.13
PSEN1-210ENST00000554131 PICALMQ13492 652 aa22.14■■□□□ 1.13
PSEN1-210ENST00000554131 MAPKAPK5Q8IW41 473 aa22.14■■□□□ 1.13
PSEN1-210ENST00000554131 SMC1BQ8NDV3 1235 aa22.14■■□□□ 1.13
PSEN1-210ENST00000554131 OSBPL5Q9H0X9 879 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-210ENST00000554131 EPB41L4AQ9HCS5 686 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-210ENST00000554131 DCP1AQ9NPI6 582 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-210ENST00000554131 CCDC171Q6TFL3 1326 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 RAD50Q92878 1312 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 PASKQ96RG2 1323 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 SGSM2O43147 1006 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 CDC45O75419 566 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 VPS53Q5VIR6 699 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 PRAMEF18Q5VWM3 479 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 SLC4A4Q9Y6R1 1079 aa22.13■■□□□ 1.13
PSEN1-210ENST00000554131 TRPM7Q96QT4 1865 aa22.12■■□□□ 1.13
PSEN1-210ENST00000554131 DDTLA6NHG4 134 aaPredicted RBP22.12■■□□□ 1.13
PSEN1-210ENST00000554131 TNNI2P48788 182 aa22.12■■□□□ 1.13
PSEN1-210ENST00000554131 CDCA5Q96FF9 252 aa22.12■■□□□ 1.13
PSEN1-210ENST00000554131 ATP8A2Q9NTI2 1148 aa22.12■■□□□ 1.13
PSEN1-210ENST00000554131 GNAT2P19087 354 aa22.11■■□□□ 1.13
PSEN1-210ENST00000554131 USP5P45974 858 aa22.11■■□□□ 1.13
PSEN1-210ENST00000554131 NBPF12Q5TAG4 269 aaPredicted RBP22.11■■□□□ 1.13
PSEN1-210ENST00000554131 ESYT1Q9BSJ8 1104 aa22.11■■□□□ 1.13
PSEN1-210ENST00000554131 LAMB1P07942 1786 aa22.11■■□□□ 1.13
PSEN1-210ENST00000554131 PAPPA2Q9BXP8 1791 aa22.11■■□□□ 1.13
PSEN1-210ENST00000554131 PATL2C9JE40 543 aaKnown RBP22.1■■□□□ 1.13
PSEN1-210ENST00000554131 EVX2Q03828 476 aa22.1■■□□□ 1.13
PSEN1-210ENST00000554131 FSTL1Q12841 308 aa22.1■■□□□ 1.13
PSEN1-210ENST00000554131 GIMAP6Q6P9H5 292 aa22.1■■□□□ 1.13
PSEN1-210ENST00000554131 HSPD1P10809 573 aaKnown RBP22.09■■□□□ 1.13
PSEN1-210ENST00000554131 RUFY2Q8WXA3 655 aa22.09■■□□□ 1.13
PSEN1-210ENST00000554131 PALD1Q9ULE6 856 aa22.09■■□□□ 1.13
PSEN1-210ENST00000554131 IFNL3Q8IZI9 196 aa22.08■■□□□ 1.13
PSEN1-210ENST00000554131 SAP30BPQ9UHR5 308 aaKnown RBP22.08■■□□□ 1.13
PSEN1-210ENST00000554131 SMIM22K7EJ46 135 aa22.07■■□□□ 1.12
PSEN1-210ENST00000554131 SLURP2P0DP57 97 aa22.07■■□□□ 1.12
PSEN1-210ENST00000554131 MAP3K10Q02779 954 aa22.07■■□□□ 1.12
PSEN1-210ENST00000554131 ALX1Q15699 326 aa22.07■■□□□ 1.12
PSEN1-210ENST00000554131 CTR9Q6PD62 1173 aa22.07■■□□□ 1.12
PSEN1-210ENST00000554131 METTL16Q86W50 562 aaKnown RBP22.07■■□□□ 1.12
PSEN1-210ENST00000554131 ZMYM6O95789 1325 aa22.06■■□□□ 1.12
PSEN1-210ENST00000554131 LAMA4Q16363 1823 aa22.06■■□□□ 1.12
PSEN1-210ENST00000554131 CYP2D6P10635 497 aa22.06■■□□□ 1.12
PSEN1-210ENST00000554131 PLCD1P51178 756 aa22.06■■□□□ 1.12
PSEN1-210ENST00000554131 MFAP1P55081 439 aaKnown RBP22.06■■□□□ 1.12
PSEN1-210ENST00000554131 CST9Q5W186 159 aa22.06■■□□□ 1.12
PSEN1-210ENST00000554131 DHX36Q9H2U1 1008 aaKnown RBP22.06■■□□□ 1.12
PSEN1-210ENST00000554131 MCM9Q9NXL9 1143 aa22.06■■□□□ 1.12
PSEN1-210ENST00000554131 OTOFQ9HC10 1997 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 CYP2D7A0A087X1C5 515 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 USP17L12C9JPN9 530 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 USP17L21D6R901 530 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 PTH1RQ03431 593 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 SBK1Q52WX2 424 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 CSRNP1Q96S65 589 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 DSCC1Q9BVC3 393 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 DNAJC18Q9H819 358 aa22.05■■□□□ 1.12
PSEN1-210ENST00000554131 FGAP02671 866 aa22.04■■□□□ 1.12
PSEN1-210ENST00000554131 SLC4A8Q2Y0W8 1093 aa22.04■■□□□ 1.12
PSEN1-210ENST00000554131 C12orf60Q5U649 245 aa22.04■■□□□ 1.12
PSEN1-210ENST00000554131 LSG1Q9H089 658 aaKnown RBP22.04■■□□□ 1.12
PSEN1-210ENST00000554131 FZD1Q9UP38 647 aa22.04■■□□□ 1.12
PSEN1-210ENST00000554131 ROBO3Q96MS0 1386 aa22.03■■□□□ 1.12
PSEN1-210ENST00000554131 APPP05067 770 aa22.03■■□□□ 1.12
PSEN1-210ENST00000554131 GABPAQ06546 454 aa22.03■■□□□ 1.12
PSEN1-210ENST00000554131 SUPT20HL1Q3ZLR7 823 aa22.03■■□□□ 1.12
PSEN1-210ENST00000554131 ZSCAN29Q8IWY8 852 aaPredicted RBP22.03■■□□□ 1.12
PSEN1-210ENST00000554131 EHD4Q9H223 541 aa22.03■■□□□ 1.12
PSEN1-210ENST00000554131 PI4KBQ9UBF8 816 aa22.03■■□□□ 1.12
PSEN1-210ENST00000554131 ARPP21Q9UBL0 812 aaPredicted RBP22.03■■□□□ 1.12
PSEN1-210ENST00000554131 TBC1D12O60347 775 aa22.02■■□□□ 1.12
PSEN1-210ENST00000554131 TDO2P48775 406 aa22.02■■□□□ 1.12
PSEN1-210ENST00000554131 CASC1Q6TDU7 716 aa22.02■■□□□ 1.12
PSEN1-210ENST00000554131 NACAP1Q9BZK3 213 aa22.02■■□□□ 1.12
PSEN1-210ENST00000554131 USP2O75604 605 aaPredicted RBP22.01■■□□□ 1.11
PSEN1-210ENST00000554131 CELF2O95319 508 aaKnown RBP22.01■■□□□ 1.11
PSEN1-210ENST00000554131 POLR3DP05423 398 aaPredicted RBP22.01■■□□□ 1.11
PSEN1-210ENST00000554131 MAP3K11Q16584 847 aa22.01■■□□□ 1.11
PSEN1-210ENST00000554131 C8orf34Q49A92 452 aa22.01■■□□□ 1.11
PSEN1-210ENST00000554131 MIGA2Q7L4E1 593 aa22.01■■□□□ 1.11
PSEN1-210ENST00000554131 TTC6Q86TZ1 520 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms