RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 FOSBP53539 338 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 MLLT1Q03111 559 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 FAM47CQ5HY64 1035 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 STRIP1Q5VSL9 837 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 DCAF15Q66K64 600 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 DPP9Q86TI2 863 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ZNF444Q8N0Y2 327 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 PPP1R13LQ8WUF5 828 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ZNF296Q8WUU4 475 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 DDX11Q96FC9 970 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CRBNQ96SW2 442 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 MCOLN1Q9GZU1 580 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ANTXR1Q9H6X2 564 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ARMT1Q9H993 441 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 ZSWIM6Q9HCJ5 1215 aa3.02□□□□□ -1.93
PRPF39-205ENST00000554081 RP1L1Q8IWN7 2480 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-205ENST00000554081 CEMIPQ8WUJ3 1361 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 BTAF1O14981 1849 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ALDH1L1O75891 902 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ITGBL1O95965 494 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 CHGBP05060 677 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 HOXB7P09629 217 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 HOXA10P31260 410 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 BRPF1P55201 1214 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 RASGRF1Q13972 1273 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 Q3C1V9 767 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 SPTY2D1Q68D10 685 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 CCDC129Q6ZRS4 1044 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 TMC4Q7Z404 712 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ZFPM1Q8IX07 1006 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 SLF2Q8IX21 1173 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ANKRD13AQ8IZ07 590 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 CERS5Q8N5B7 392 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 SLC44A5Q8NCS7 719 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 NUP133Q8WUM0 1156 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ZFP91Q96JP5 570 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ZNF341Q9BYN7 854 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 TLR7Q9NYK1 1049 aaKnown RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ZMYND8Q9ULU4 1186 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 SLC4A4Q9Y6R1 1079 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 EP300Q09472 2414 aaPredicted RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ALS2Q96Q42 1657 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 PHRF1Q9P1Y6 1649 aaKnown RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 FLOT1O75955 427 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 GH2P01242 217 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 CA8P35219 290 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 SNAP25P60880 206 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 MAP3K9P80192 1104 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 SP3Q02447 781 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 UBE4AQ14139 1066 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 CRY2Q49AN0 593 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 DACT2Q5SW24 774 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 NSMFQ6X4W1 530 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 TICAM2Q86XR7 235 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 HOMER1Q86YM7 354 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 APOBEC3FQ8IUX4 373 aaKnown RBP3.01□□□□□ -1.93
PRPF39-205ENST00000554081 SPATA5Q8NB90 893 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 EXOC6Q8TAG9 804 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 TBC1D22AQ8WUA7 517 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 DYNLL2Q96FJ2 89 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ZKSCAN3Q9BRR0 538 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 ZFYVE28Q9HCC9 887 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 DIAPH3Q9NSV4 1193 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 DENND2AQ9ULE3 1009 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 GINS2Q9Y248 185 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 KNL1Q8NG31 2342 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 PLEKHG2Q9H7P9 1386 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 AOX1Q06278 1338 aa3.01□□□□□ -1.93
PRPF39-205ENST00000554081 TSPY2A6NKD2 308 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 GPR25O00155 361 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 CLSTN1O94985 981 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 MBD4O95243 580 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 CENPBP07199 599 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 MS4A1P11836 297 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 HOXB3P14651 431 aaPredicted RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 MECOMQ03112 1051 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 SREBF2Q12772 1141 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 VGLL4Q14135 290 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 CWC27Q6UX04 472 aaKnown RBP3□□□□□ -1.93
PRPF39-205ENST00000554081 KIAA1211Q6ZU35 1233 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3□□□□□ -1.93
PRPF39-205ENST00000554081 NBPF11Q86T75 865 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 AGBL3Q8NEM8 1001 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 C7orf43Q8WVR3 580 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 DPF2Q92785 391 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 KIFC2Q96AC6 838 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 DEFB118Q96PH6 123 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 NAPBQ9H115 298 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 R3HDMLQ9H3Y0 253 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 RNF186Q9NXI6 227 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 PRKAG2Q9UGJ0 569 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 DDX19BQ9UMR2 479 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 MROH5Q6ZUA9 1318 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 DOT1LQ8TEK3 1739 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 MAGEB6P1A0A0J9YX57 407 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 USP17L12C9JPN9 530 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 USP17L21D6R901 530 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 PRKAB2O43741 272 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 FKTNO75072 461 aa3□□□□□ -1.93
PRPF39-205ENST00000554081 FOXO4P98177 505 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms