RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 MIGA1Q8NAN2 632 aa13.57□□□□□ -0.24
IFT43-206ENST00000554026 SH3RF3Q8TEJ3 882 aaPredicted RBP13.57□□□□□ -0.24
IFT43-206ENST00000554026 FAM198AQ9UFP1 575 aa13.57□□□□□ -0.24
IFT43-206ENST00000554026 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
IFT43-206ENST00000554026 ABT1Q9ULW3 272 aaKnown RBP13.57□□□□□ -0.24
IFT43-206ENST00000554026 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
IFT43-206ENST00000554026 PAPPA2Q9BXP8 1791 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 FOXN1O15353 648 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 IREB2P48200 963 aaKnown RBP13.56□□□□□ -0.24
IFT43-206ENST00000554026 TCP10Q12799 353 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 NFIAQ12857 509 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 PICALMQ13492 652 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 TTC22Q5TAA0 569 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 ZSCAN29Q8IWY8 852 aaPredicted RBP13.56□□□□□ -0.24
IFT43-206ENST00000554026 RILPL2Q969X0 211 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 TEPSINQ96N21 525 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 RIOK1Q9BRS2 568 aaKnown RBP13.56□□□□□ -0.24
IFT43-206ENST00000554026 TMEM39BQ9GZU3 492 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
IFT43-206ENST00000554026 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 ATRNL1Q5VV63 1379 aa13.56□□□□□ -0.24
IFT43-206ENST00000554026 HLA-DOAP06340 250 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 ECE1P42892 770 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
IFT43-206ENST00000554026 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
IFT43-206ENST00000554026 MAP3K11Q16584 847 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 NBPF12Q5TAG4 269 aaPredicted RBP13.55□□□□□ -0.24
IFT43-206ENST00000554026 SAPCD2Q86UD0 394 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 AMOTL1Q8IY63 956 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 TGFBRAP1Q8WUH2 860 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 CSRNP1Q96S65 589 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 HELLSQ9NRZ9 838 aa13.55□□□□□ -0.24
IFT43-206ENST00000554026 SCAF8Q9UPN6 1271 aaKnown RBP13.55□□□□□ -0.24
IFT43-206ENST00000554026 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 MBD4O95243 580 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 VEGFBP49765 207 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 HUNKP57058 714 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
IFT43-206ENST00000554026 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 PRAMEF18Q5VWM3 479 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 GIMAP6Q6P9H5 292 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 ZNF341Q9BYN7 854 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 PI4KBQ9UBF8 816 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 FLT1P17948 1338 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 AK9Q5TCS8 1911 aa13.54□□□□□ -0.24
IFT43-206ENST00000554026 FOCADQ5VW36 1801 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 TBC1D12O60347 775 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
IFT43-206ENST00000554026 FOXP4Q8IVH2 680 aaPredicted RBP13.53□□□□□ -0.24
IFT43-206ENST00000554026 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 ANKRD13AQ8IZ07 590 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 LCORLQ8N3X6 602 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 TRIM34Q9BYJ4 488 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 NACAP1Q9BZK3 213 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 PUS7LQ9H0K6 701 aaKnown RBP13.53□□□□□ -0.24
IFT43-206ENST00000554026 ARMT1Q9H993 441 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 DDX4Q9NQI0 724 aaKnown RBP13.53□□□□□ -0.24
IFT43-206ENST00000554026 PRDM10Q9NQV6 1147 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 DIAPH3Q9NSV4 1193 aa13.53□□□□□ -0.24
IFT43-206ENST00000554026 HERC5Q9UII4 1024 aaKnown RBP13.53□□□□□ -0.24
IFT43-206ENST00000554026 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
IFT43-206ENST00000554026 SDSP20132 328 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 MCMDC2Q4G0Z9 681 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 LDLRAD1Q5T700 205 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 DLK2Q6UY11 383 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 RUFY2Q8WXA3 655 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 OSBP2Q969R2 916 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.25
IFT43-206ENST00000554026 SLC4A4Q9Y6R1 1079 aa13.52□□□□□ -0.25
IFT43-206ENST00000554026 CDK5RAP2Q96SN8 1893 aa13.51□□□□□ -0.25
IFT43-206ENST00000554026 DDTLA6NHG4 134 aaPredicted RBP13.51□□□□□ -0.25
IFT43-206ENST00000554026 GPAA1O43292 621 aa13.51□□□□□ -0.25
IFT43-206ENST00000554026 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
IFT43-206ENST00000554026 POLR3DP05423 398 aaPredicted RBP13.51□□□□□ -0.25
IFT43-206ENST00000554026 MAP3K9P80192 1104 aa13.51□□□□□ -0.25
IFT43-206ENST00000554026 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
IFT43-206ENST00000554026 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
IFT43-206ENST00000554026 CRACR2BQ8N4Y2 399 aaPredicted RBP13.51□□□□□ -0.25
IFT43-206ENST00000554026 EHD4Q9H223 541 aa13.51□□□□□ -0.25
IFT43-206ENST00000554026 CSADQ9Y600 493 aa13.51□□□□□ -0.25
IFT43-206ENST00000554026 SSC5DA1L4H1 1573 aa13.5□□□□□ -0.25
IFT43-206ENST00000554026 PATL2C9JE40 543 aaKnown RBP13.5□□□□□ -0.25
IFT43-206ENST00000554026 UBE2Q2LH0YL09 131 aa13.5□□□□□ -0.25
IFT43-206ENST00000554026 ZNF157P51786 506 aaPredicted RBP13.5□□□□□ -0.25
IFT43-206ENST00000554026 PRKG1Q13976 671 aa13.5□□□□□ -0.25
IFT43-206ENST00000554026 METTL16Q86W50 562 aaKnown RBP13.5□□□□□ -0.25
IFT43-206ENST00000554026 ZFPM1Q8IX07 1006 aa13.5□□□□□ -0.25
IFT43-206ENST00000554026 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
IFT43-206ENST00000554026 SLC10A4Q96EP9 437 aa13.5□□□□□ -0.25
IFT43-206ENST00000554026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.5□□□□□ -0.25
IFT43-206ENST00000554026 DCP1AQ9NPI6 582 aaPredicted RBP13.5□□□□□ -0.25
IFT43-206ENST00000554026 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
IFT43-206ENST00000554026 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
IFT43-206ENST00000554026 ZNF112Q9UJU3 913 aa13.5□□□□□ -0.25
IFT43-206ENST00000554026 MYH1P12882 1939 aa13.49□□□□□ -0.25
IFT43-206ENST00000554026 APPP05067 770 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms