RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 WDR90Q96KV7 1748 aa11.63□□□□□ -0.55
CHD8-204ENST00000553622 FLT1P17948 1338 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 WNT10BO00744 389 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 ZNF213O14771 459 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 CYP2D6P10635 497 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 ZKSCAN1P17029 563 aaPredicted RBP11.62□□□□□ -0.55
CHD8-204ENST00000553622 MMP14P50281 582 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 NFIAQ12857 509 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 ALX1Q15699 326 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
CHD8-204ENST00000553622 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 TRPM4Q8TD43 1214 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 HACL1Q9UJ83 578 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 PALD1Q9ULE6 856 aa11.62□□□□□ -0.55
CHD8-204ENST00000553622 USP17L12C9JPN9 530 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 USP17L21D6R901 530 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 EPB41L2O43491 1005 aaKnown RBP11.61□□□□□ -0.55
CHD8-204ENST00000553622 WDHD1O75717 1129 aaPredicted RBP11.61□□□□□ -0.55
CHD8-204ENST00000553622 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 PPARAQ07869 468 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 SPDYE2Q495Y8 402 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 GIMAP6Q6P9H5 292 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 ZNF526Q8TF50 670 aaPredicted RBP11.61□□□□□ -0.55
CHD8-204ENST00000553622 DDX4Q9NQI0 724 aaKnown RBP11.61□□□□□ -0.55
CHD8-204ENST00000553622 TSHZ2Q9NRE2 1034 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 ADARB2Q9NS39 739 aaKnown RBP11.61□□□□□ -0.55
CHD8-204ENST00000553622 TOMM22Q9NS69 142 aa11.61□□□□□ -0.55
CHD8-204ENST00000553622 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
CHD8-204ENST00000553622 SCAF8Q9UPN6 1271 aaKnown RBP11.61□□□□□ -0.55
CHD8-204ENST00000553622 ASTN2O75129 1339 aaPredicted RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 ZMYM6O95789 1325 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 SIPA1L1O43166 1804 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 IQCA1LA6NCM1 817 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 SLC3A2P08195 630 aaKnown RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 CYP21A2P08686 494 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 RBM25P49756 843 aaKnown RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 EAPPQ56P03 285 aaPredicted RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 RRP12Q5JTH9 1297 aaKnown RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 CTR9Q6PD62 1173 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 JAKMIP1Q96N16 626 aaKnown RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 OSBPL5Q9H0X9 879 aaPredicted RBP11.6□□□□□ -0.55
CHD8-204ENST00000553622 FAM198AQ9UFP1 575 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
CHD8-204ENST00000553622 ATAD5Q96QE3 1844 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 HLA-DOAP06340 250 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 EPHX2P34913 555 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 TNNI2P48788 182 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 ANGEL2Q5VTE6 544 aaKnown RBP11.59□□□□□ -0.55
CHD8-204ENST00000553622 ZFPM1Q8IX07 1006 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 ZBED3Q96IU2 234 aaPredicted RBP11.59□□□□□ -0.55
CHD8-204ENST00000553622 IDI2Q9BXS1 227 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 TRIM34Q9BYJ4 488 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 GGA3Q9NZ52 723 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 TAF6LQ9Y6J9 622 aa11.59□□□□□ -0.55
CHD8-204ENST00000553622 E7EWF7 191 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 SMIM22K7EJ46 135 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 ENTPD3O75355 529 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 CASTP20810 708 aaKnown RBP11.58□□□□□ -0.56
CHD8-204ENST00000553622 ANAPC15P60006 121 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 EVX2Q03828 476 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 TRDNQ13061 729 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 TNFAIP1Q13829 316 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 KRT32Q14532 448 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 SBK1Q52WX2 424 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 C12orf60Q5U649 245 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 MFSD6Q6ZSS7 791 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
CHD8-204ENST00000553622 TTC6Q86TZ1 520 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
CHD8-204ENST00000553622 TBC1D10CQ8IV04 446 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 CRACR2BQ8N4Y2 399 aaPredicted RBP11.58□□□□□ -0.56
CHD8-204ENST00000553622 DYNLL2Q96FJ2 89 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 INCENPQ9NQS7 918 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
CHD8-204ENST00000553622 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 MYH4Q9Y623 1939 aa11.58□□□□□ -0.56
CHD8-204ENST00000553622 PSMA5P28066 241 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 PLCD1P51178 756 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
CHD8-204ENST00000553622 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 AKNAD1Q5T1N1 836 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 STOX1Q6ZVD7 989 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 DCPSQ96C86 337 aaKnown RBP11.57□□□□□ -0.56
CHD8-204ENST00000553622 UPF3BQ9BZI7 483 aaKnown RBP11.57□□□□□ -0.56
CHD8-204ENST00000553622 TMEM39BQ9GZU3 492 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 NBPF3Q9H094 633 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 RNF41Q9H4P4 317 aaPredicted RBP11.57□□□□□ -0.56
CHD8-204ENST00000553622 TAF1DQ9H5J8 278 aaPredicted RBP11.57□□□□□ -0.56
CHD8-204ENST00000553622 RRAGCQ9HB90 399 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 NEDD4P46934 1319 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 UTRNP46939 3433 aa11.57□□□□□ -0.56
CHD8-204ENST00000553622 CNTNAP1P78357 1384 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 DDTLA6NHG4 134 aaPredicted RBP11.56□□□□□ -0.56
CHD8-204ENST00000553622 B4E1Z4 1266 aa11.56□□□□□ -0.56
CHD8-204ENST00000553622 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
CHD8-204ENST00000553622 PRDM1O75626 825 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms