RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RHBDL3P58872 404 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 PPATQ06203 517 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 PPIL2Q13356 520 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 CCL15Q16663 113 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 ZFPM1Q8IX07 1006 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 EAF2Q96CJ1 260 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-207ENST00000553290 CCDC8Q9H0W5 538 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-207ENST00000553290 SNRKQ9NRH2 765 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 DOCK2Q92608 1830 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 CETPP11597 493 aa15.86■□□□□ 0.13
ACTN1-207ENST00000553290 INPP5BP32019 993 aa15.86■□□□□ 0.13
ACTN1-207ENST00000553290 ZSCAN29Q8IWY8 852 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-207ENST00000553290 BRI3BPQ8WY22 251 aa15.86■□□□□ 0.13
ACTN1-207ENST00000553290 NOL10Q9BSC4 688 aaKnown RBP15.86■□□□□ 0.13
ACTN1-207ENST00000553290 DDX4Q9NQI0 724 aaKnown RBP15.86■□□□□ 0.13
ACTN1-207ENST00000553290 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
ACTN1-207ENST00000553290 IRF6O14896 467 aa15.85■□□□□ 0.13
ACTN1-207ENST00000553290 CYP2E1P05181 493 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-207ENST00000553290 MAP3K10Q02779 954 aa15.85■□□□□ 0.13
ACTN1-207ENST00000553290 CRHR2Q13324 411 aa15.85■□□□□ 0.13
ACTN1-207ENST00000553290 SNAPC2Q13487 334 aa15.85■□□□□ 0.13
ACTN1-207ENST00000553290 PICALMQ13492 652 aa15.85■□□□□ 0.13
ACTN1-207ENST00000553290 NOL9Q5SY16 702 aaKnown RBP15.85■□□□□ 0.13
ACTN1-207ENST00000553290 NAA16Q6N069 864 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-207ENST00000553290 ATRNL1Q5VV63 1379 aa15.85■□□□□ 0.13
ACTN1-207ENST00000553290 MAST2Q6P0Q8 1798 aa15.85■□□□□ 0.13
ACTN1-207ENST00000553290 DDTLA6NHG4 134 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-207ENST00000553290 BAG3O95817 575 aa15.84■□□□□ 0.13
ACTN1-207ENST00000553290 PLCG2P16885 1265 aa15.84■□□□□ 0.13
ACTN1-207ENST00000553290 ZAP70P43403 619 aa15.84■□□□□ 0.13
ACTN1-207ENST00000553290 SH3BP5LQ7L8J4 393 aa15.84■□□□□ 0.13
ACTN1-207ENST00000553290 AACSQ86V21 672 aa15.84■□□□□ 0.13
ACTN1-207ENST00000553290 RHPN1Q8TCX5 695 aa15.84■□□□□ 0.13
ACTN1-207ENST00000553290 KIF1BPQ96EK5 621 aa15.84■□□□□ 0.13
ACTN1-207ENST00000553290 ZCCHC17Q9NP64 241 aaKnown RBP15.84■□□□□ 0.13
ACTN1-207ENST00000553290 PHF20L1A8MW92 1017 aa15.83■□□□□ 0.12
ACTN1-207ENST00000553290 TAF1CQ15572 869 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-207ENST00000553290 SIRT2Q8IXJ6 389 aa15.83■□□□□ 0.12
ACTN1-207ENST00000553290 CLASRPQ8N2M8 674 aaKnown RBP15.83■□□□□ 0.12
ACTN1-207ENST00000553290 ZFYVE28Q9HCC9 887 aa15.83■□□□□ 0.12
ACTN1-207ENST00000553290 COL2A1P02458 1487 aaPredicted RBP15.83■□□□□ 0.12
ACTN1-207ENST00000553290 TBC1D12O60347 775 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 RAB11FIP3O75154 756 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 PPP4CP60510 307 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 TEX11Q8IYF3 940 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 ERO1AQ96HE7 468 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 OSBPL5Q9H0X9 879 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-207ENST00000553290 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 KCNH4Q9UQ05 1017 aa15.82■□□□□ 0.12
ACTN1-207ENST00000553290 MYO5AQ9Y4I1 1855 aaKnown RBP15.82■□□□□ 0.12
ACTN1-207ENST00000553290 CTNND1O60716 968 aaKnown RBP15.81■□□□□ 0.12
ACTN1-207ENST00000553290 SP3Q02447 781 aa15.81■□□□□ 0.12
ACTN1-207ENST00000553290 FBXO46Q6PJ61 603 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-207ENST00000553290 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-207ENST00000553290 SCYL3Q8IZE3 742 aa15.81■□□□□ 0.12
ACTN1-207ENST00000553290 SH3RF3Q8TEJ3 882 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-207ENST00000553290 PIH1D3Q9NQM4 214 aaKnown RBP15.81■□□□□ 0.12
ACTN1-207ENST00000553290 PICK1Q9NRD5 415 aa15.81■□□□□ 0.12
ACTN1-207ENST00000553290 AATFQ9NY61 560 aaKnown RBP eCLIP15.81■□□□□ 0.12
ACTN1-207ENST00000553290 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
ACTN1-207ENST00000553290 CXCL11O14625 94 aa15.8■□□□□ 0.12
ACTN1-207ENST00000553290 RGS19P49795 217 aa15.8■□□□□ 0.12
ACTN1-207ENST00000553290 CERS3Q8IU89 383 aa15.8■□□□□ 0.12
ACTN1-207ENST00000553290 DHX36Q9H2U1 1008 aaKnown RBP15.8■□□□□ 0.12
ACTN1-207ENST00000553290 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
ACTN1-207ENST00000553290 APBB1O00213 710 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 IDH1O75874 414 aaKnown RBP15.79■□□□□ 0.12
ACTN1-207ENST00000553290 IFIT2P09913 472 aaKnown RBP15.79■□□□□ 0.12
ACTN1-207ENST00000553290 PTPRAP18433 802 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 CYP7A1P22680 504 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 MAP3K12Q12852 859 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 ARHGEF6Q15052 776 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 TTF1Q15361 905 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-207ENST00000553290 ANKRD23Q86SG2 305 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 ADGRA1Q86SQ6 560 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.79■□□□□ 0.12
ACTN1-207ENST00000553290 TRIM17Q9Y577 477 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 ZHX2Q9Y6X8 837 aa15.79■□□□□ 0.12
ACTN1-207ENST00000553290 DOCK1Q14185 1865 aa15.78■□□□□ 0.12
ACTN1-207ENST00000553290 TLR2O60603 784 aa15.78■□□□□ 0.12
ACTN1-207ENST00000553290 OTOP1Q7RTM1 612 aa15.78■□□□□ 0.12
ACTN1-207ENST00000553290 CD99L2Q8TCZ2 262 aa15.78■□□□□ 0.12
ACTN1-207ENST00000553290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.78■□□□□ 0.12
ACTN1-207ENST00000553290 TGFBRAP1Q8WUH2 860 aa15.78■□□□□ 0.12
ACTN1-207ENST00000553290 PI4KBQ9UBF8 816 aa15.78■□□□□ 0.12
ACTN1-207ENST00000553290 HERC5Q9UII4 1024 aaKnown RBP15.78■□□□□ 0.12
ACTN1-207ENST00000553290 SLURP2P0DP57 97 aa15.77■□□□□ 0.12
ACTN1-207ENST00000553290 FASTKD5Q7L8L6 764 aaKnown RBP15.77■□□□□ 0.12
ACTN1-207ENST00000553290 MAGEB6Q8N7X4 407 aa15.77■□□□□ 0.12
ACTN1-207ENST00000553290 ANTXR1Q9H6X2 564 aa15.77■□□□□ 0.12
ACTN1-207ENST00000553290 EFCC1Q9HA90 598 aa15.77■□□□□ 0.12
ACTN1-207ENST00000553290 AFG3L2Q9Y4W6 797 aa15.77■□□□□ 0.12
ACTN1-207ENST00000553290 NDUFB9Q9Y6M9 179 aa15.77■□□□□ 0.12
ACTN1-207ENST00000553290 CDK5RAP2Q96SN8 1893 aa15.77■□□□□ 0.11
ACTN1-207ENST00000553290 FOCADQ5VW36 1801 aa15.77■□□□□ 0.11
ACTN1-207ENST00000553290 FLT1P17948 1338 aa15.76■□□□□ 0.11
ACTN1-207ENST00000553290 PDHXO00330 501 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms