RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 CRNKL1Q9BZJ0 848 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 FTOQ9C0B1 505 aaKnown RBP eCLIP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 GGA1Q9UJY5 639 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 IRS2Q9Y4H2 1338 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 C6orf229H3BNL8 230 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 SPTY2D1Q68D10 685 aaPredicted RBP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 COL23A1Q86Y22 540 aaPredicted RBP10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 BICD2Q8TD16 824 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 CFAP45Q9UL16 551 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 ELP1O95163 1332 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 ANKRD31Q8N7Z5 1873 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 USP17L12C9JPN9 530 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 USP17L21D6R901 530 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 CDKL5O76039 1030 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 RXRBP28702 533 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 LIFRP42702 1097 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 MSL1Q68DK7 614 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 SGMS1Q86VZ5 419 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 WDR66Q8TBY9 1149 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 NUP133Q8WUM0 1156 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 ESR2Q92731 530 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 AIFM3Q96NN9 605 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 BRIP1Q9BX63 1249 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 TSPY26PQ9H489 355 aa10.61□□□□□ -0.71
RAB3IP-218ENST00000553099 LAMB1P07942 1786 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 GOLGB1Q14789 3259 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 MYH6P13533 1939 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 PLSCR1O15162 318 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 EVX2Q03828 476 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 DIXDC1Q155Q3 683 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 CTR9Q6PD62 1173 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 CCDC82Q8N4S0 544 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 DUOX1Q9NRD9 1551 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 POLR3DP05423 398 aaPredicted RBP10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 ATP2B4P23634 1241 aa10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 TDRD7Q8NHU6 1098 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 DCP1AQ9NPI6 582 aaPredicted RBP10.6□□□□□ -0.71
RAB3IP-218ENST00000553099 TNKSO95271 1327 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 BBOX1O75936 387 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 LIG1P18858 919 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 HMGB2P26583 209 aaKnown RBP10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 GRIK5Q16478 980 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 GIMAP6Q6P9H5 292 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 NLGN1Q8N2Q7 840 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 FBXO18Q8NFZ0 1043 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 USP28Q96RU2 1077 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 ALG1Q9BT22 464 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 SLC26A6Q9BXS9 759 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 CD209Q9NNX6 404 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 MMP10P09238 476 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 USP5P45974 858 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 CAMK4Q16566 473 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 NOL10Q9BSC4 688 aaKnown RBP10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 MCM9Q9NXL9 1143 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 POLLQ9UGP5 575 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 ANAPC4Q9UJX5 808 aa10.59□□□□□ -0.71
RAB3IP-218ENST00000553099 UBE2Q2LH0YL09 131 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 CYP2D6P10635 497 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 GNL2Q13823 731 aaKnown RBP10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 RTN1Q16799 776 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 TBC1D16Q8TBP0 767 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 FBXW7Q969H0 707 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 DACT1Q9NYF0 836 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 KIAA1551Q9HCM1 1747 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 HOXA10P31260 410 aaPredicted RBP10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 IQCA1Q86XH1 822 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 ZNF654Q8IZM8 581 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 PGBD1Q96JS3 809 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 CRAMP1Q96RY5 1269 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 NUP62CLQ9H1M0 184 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 ATP8A2Q9NTI2 1148 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 FAM217BQ9NTX9 383 aaPredicted RBP10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 PARP3Q9Y6F1 533 aa10.58□□□□□ -0.72
RAB3IP-218ENST00000553099 LETM1O95202 739 aaPredicted RBP10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 SSRP1Q08945 709 aaKnown RBP10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 TRIM29Q14134 588 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 NTRK3Q16288 839 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 TMTC2Q8N394 836 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 SH3RF3Q8TEJ3 882 aaPredicted RBP10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 ARPP21Q9UBL0 812 aaPredicted RBP10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 BAZ2BQ9UIF8 2168 aaKnown RBP10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 KIF28PB7ZC32 967 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 SLC3A2P08195 630 aaKnown RBP10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 ME1P48163 572 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 GSTO1P78417 241 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 FAM47AQ5JRC9 791 aa10.57□□□□□ -0.72
RAB3IP-218ENST00000553099 IFIT1BQ5T764 474 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms