RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 VPS16Q9H269 839 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 INCENPQ9NQS7 918 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 RRP15Q9Y3B9 282 aaKnown RBP13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 ZRANB2O95218 330 aaKnown RBP eCLIP13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 GPTP24298 496 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 TDO2P48775 406 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 SART3Q15020 963 aaKnown RBP13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 PDIA6Q15084 440 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 SMYD4Q8IYR2 804 aaPredicted RBP13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 GBP3Q9H0R5 595 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
PPFIA2-227ENST00000552948 ZFYP08048 801 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 CASP1P29466 404 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 METTL16Q86W50 562 aaKnown RBP13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 APPBP2Q92624 585 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 CABP5Q9NP86 173 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 hCG_1642624A0A1W2PR95 340 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 RGS22Q8NE09 1264 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 CRACR2AQ9BSW2 395 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 MAN1B1Q9UKM7 699 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 MRFAP1Q9Y605 127 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 UBE2Q2LH0YL09 131 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 ACTN2P35609 894 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 RFX5P48382 616 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 GTF2A1P52655 376 aaPredicted RBP13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 SLC35F6Q8N357 371 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 GOLGA5Q8TBA6 731 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 SLF1Q9BQI6 1058 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 ABCB6Q9NP58 842 aa13.19□□□□□ -0.3
PPFIA2-227ENST00000552948 CCDC151A5D8V7 595 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 TEX33O43247 280 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 TFRCP02786 760 aaKnown RBP13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 IVLP07476 585 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 MAP3K9P80192 1104 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 BRD3Q15059 726 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 MLKLQ8NB16 471 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 FAM89AQ96GI7 184 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 MRPL44Q9H9J2 332 aaKnown RBP13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 ITSN1Q15811 1721 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 PRR29P0C7W0 189 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 FCHSD1Q86WN1 690 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 ACRBPQ8NEB7 543 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 CDC27P30260 824 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 FMR1Q06787 632 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 RBL2Q08999 1139 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 KIAA1328Q86T90 577 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 LCMT1Q9UIC8 334 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 MTMR7Q9Y216 660 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
PPFIA2-227ENST00000552948 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 KCNJ6P48051 423 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 CABLES1Q8TDN4 633 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 WASF1Q92558 559 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 CASP14P31944 242 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 FKBP15Q5T1M5 1219 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 EXOC4Q96A65 974 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 H3BQF6 201 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 ZMYND10O75800 440 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 RRAGBQ5VZM2 374 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 APOA5Q6Q788 366 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 TC2NQ8N9U0 490 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 FUT8Q9BYC5 575 aa13.17□□□□□ -0.3
PPFIA2-227ENST00000552948 ADAMTS13Q76LX8 1427 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 XBP1P17861 261 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 NR5A1Q13285 461 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 SCARF1Q14162 830 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 FOXP4Q8IVH2 680 aaPredicted RBP13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 IPO4Q8TEX9 1081 aaKnown RBP13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 UBAC1Q9BSL1 405 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 TTC31Q49AM3 519 aaPredicted RBP13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 CCDC70Q6NSX1 233 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 SENP2Q9HC62 589 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 ENC1O14682 589 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 PPP6R2O75170 966 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 GRIN1Q05586 938 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 RTN1Q16799 776 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 GPATCH11Q8N954 259 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 DEF6Q9H4E7 631 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 TUBE1Q9UJT0 475 aa13.16□□□□□ -0.3
PPFIA2-227ENST00000552948 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms