RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 FSD1Q9BTV5 496 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 NACAP1Q9BZK3 213 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 ZNF287Q9HBT7 754 aa12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRAFD1-208ENST00000552890 ATRNL1Q5VV63 1379 aa12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 RNF113AO15541 343 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 ZNF157P51786 506 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 PI4K2BQ8TCG2 481 aa12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 APPBP2Q92624 585 aa12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 CSRNP1Q96S65 589 aa12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 TMEM39BQ9GZU3 492 aa12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 ASTN2O75129 1339 aaPredicted RBP12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 ZNF532Q9HCE3 1301 aa12.35□□□□□ -0.43
TRAFD1-208ENST00000552890 RHBDL3P58872 404 aa12.34□□□□□ -0.43
TRAFD1-208ENST00000552890 LDLRAD1Q5T700 205 aa12.34□□□□□ -0.43
TRAFD1-208ENST00000552890 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-208ENST00000552890 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
TRAFD1-208ENST00000552890 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
TRAFD1-208ENST00000552890 ANTXR1Q9H6X2 564 aa12.34□□□□□ -0.43
TRAFD1-208ENST00000552890 SALL3Q9BXA9 1300 aa12.34□□□□□ -0.43
TRAFD1-208ENST00000552890 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 CTNND1O60716 968 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 NT5C2P49902 561 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 MAP3K10Q02779 954 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 SREBF2Q12772 1141 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 TCP10Q12799 353 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 PICALMQ13492 652 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 CRACR2BQ8N4Y2 399 aaPredicted RBP12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 RUFY2Q8WXA3 655 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 CAPNS2Q96L46 248 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 TEPSINQ96N21 525 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 PPP4R2Q9NY27 417 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 FAM198AQ9UFP1 575 aa12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 WDR33Q9C0J8 1336 aaKnown RBP12.33□□□□□ -0.44
TRAFD1-208ENST00000552890 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 SLC3A2P08195 630 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 ZNF384Q8TF68 577 aa12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 EHD4Q9H223 541 aa12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 DOCK2Q92608 1830 aa12.32□□□□□ -0.44
TRAFD1-208ENST00000552890 TCRBV5S4A2TA0A5A2 114 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 MANSC4A6NHS7 340 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 USP2O75604 605 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 CACNB3P54284 484 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 NFIAQ12857 509 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 DNAJC5GQ8N7S2 189 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 JMYQ8N9B5 988 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 MIGA1Q8NAN2 632 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 WRNIP1Q96S55 665 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 RIOK1Q9BRS2 568 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 ARPP21Q9UBL0 812 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 FLT1P17948 1338 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
TRAFD1-208ENST00000552890 UBE2Q2LH0YL09 131 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 MBD4O95243 580 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 SLC10A3P09131 477 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 PPATQ06203 517 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 NOL9Q5SY16 702 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 METTL16Q86W50 562 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 RILPL2Q969X0 211 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 DIAPH3Q9NSV4 1193 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 MKRN1Q9UHC7 482 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 ZNF112Q9UJU3 913 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 NDUFB9Q9Y6M9 179 aa12.3□□□□□ -0.44
TRAFD1-208ENST00000552890 ASNSP08243 561 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 VEGFBP49765 207 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 GTF2A2P52657 109 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 MCMDC2Q4G0Z9 681 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 ZMYM1Q5SVZ6 1142 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 PRAMEF18Q5VWM3 479 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 MAPKAPK5Q8IW41 473 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 AS3MTQ9HBK9 375 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 ZCCHC17Q9NP64 241 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 CABP5Q9NP86 173 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 SLC4A4Q9Y6R1 1079 aa12.29□□□□□ -0.44
TRAFD1-208ENST00000552890 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 APPP05067 770 aa12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 PRKG1Q13976 671 aa12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
TRAFD1-208ENST00000552890 EDC3Q96F86 508 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms