RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 DIS3LQ8TF46 1054 aaKnown RBP19.23■□□□□ 0.67
CACNB3-220ENST00000551716 PRKRIP1Q9H875 184 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-220ENST00000551716 HMX1Q9NP08 348 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-220ENST00000551716 RPTORQ8N122 1335 aa19.23■□□□□ 0.67
CACNB3-220ENST00000551716 HMGCRP04035 888 aa19.22■□□□□ 0.67
CACNB3-220ENST00000551716 SRCIN1Q9C0H9 1055 aa19.22■□□□□ 0.67
CACNB3-220ENST00000551716 C11orf49Q9H6J7 331 aa19.22■□□□□ 0.67
CACNB3-220ENST00000551716 PNMA3Q9UL41 463 aa19.22■□□□□ 0.67
CACNB3-220ENST00000551716 LRRFIP2Q9Y608 721 aaKnown RBP19.22■□□□□ 0.67
CACNB3-220ENST00000551716 PHF20L1A8MW92 1017 aa19.21■□□□□ 0.67
CACNB3-220ENST00000551716 FAM109BQ6ICB4 259 aaPredicted RBP19.21■□□□□ 0.67
CACNB3-220ENST00000551716 USP40Q9NVE5 1235 aa19.21■□□□□ 0.67
CACNB3-220ENST00000551716 DAGLAQ9Y4D2 1042 aa19.21■□□□□ 0.67
CACNB3-220ENST00000551716 CTNND1O60716 968 aaKnown RBP19.2■□□□□ 0.66
CACNB3-220ENST00000551716 GCLCP48506 637 aaPredicted RBP19.2■□□□□ 0.66
CACNB3-220ENST00000551716 NFIAQ12857 509 aa19.2■□□□□ 0.66
CACNB3-220ENST00000551716 PUM3Q15397 648 aaKnown RBP19.2■□□□□ 0.66
CACNB3-220ENST00000551716 FAM110CQ1W6H9 321 aa19.2■□□□□ 0.66
CACNB3-220ENST00000551716 LRRC24Q50LG9 513 aa19.2■□□□□ 0.66
CACNB3-220ENST00000551716 ANKRD13CQ8N6S4 541 aa19.2■□□□□ 0.66
CACNB3-220ENST00000551716 VGLL2Q8N8G2 317 aa19.2■□□□□ 0.66
CACNB3-220ENST00000551716 FAM198AQ9UFP1 575 aa19.2■□□□□ 0.66
CACNB3-220ENST00000551716 AGTPBP1Q9UPW5 1226 aa19.2■□□□□ 0.66
CACNB3-220ENST00000551716 ENTPD3O75355 529 aa19.19■□□□□ 0.66
CACNB3-220ENST00000551716 SYN1P17600 705 aa19.19■□□□□ 0.66
CACNB3-220ENST00000551716 MAP3K10Q02779 954 aa19.19■□□□□ 0.66
CACNB3-220ENST00000551716 KAZALD1Q96I82 304 aa19.19■□□□□ 0.66
CACNB3-220ENST00000551716 SUCLG2Q96I99 432 aa19.19■□□□□ 0.66
CACNB3-220ENST00000551716 RABL6Q3YEC7 729 aaPredicted RBP19.18■□□□□ 0.66
CACNB3-220ENST00000551716 SLC4A10Q6U841 1118 aa19.18■□□□□ 0.66
CACNB3-220ENST00000551716 OGDHLQ9ULD0 1010 aa19.18■□□□□ 0.66
CACNB3-220ENST00000551716 CACNA1FO60840 1977 aa19.18■□□□□ 0.66
CACNB3-220ENST00000551716 FANCIQ9NVI1 1328 aa19.18■□□□□ 0.66
CACNB3-220ENST00000551716 LDHBP07195 334 aaKnown RBP19.17■□□□□ 0.66
CACNB3-220ENST00000551716 FGFR2P21802 821 aa19.17■□□□□ 0.66
CACNB3-220ENST00000551716 PABPC4Q13310 644 aaKnown RBP eCLIP19.17■□□□□ 0.66
CACNB3-220ENST00000551716 DIXDC1Q155Q3 683 aa19.17■□□□□ 0.66
CACNB3-220ENST00000551716 ZSCAN29Q8IWY8 852 aaPredicted RBP19.17■□□□□ 0.66
CACNB3-220ENST00000551716 IDI2Q9BXS1 227 aa19.17■□□□□ 0.66
CACNB3-220ENST00000551716 GNL3LQ9NVN8 582 aaKnown RBP19.17■□□□□ 0.66
CACNB3-220ENST00000551716 MGAMO43451 1857 aa19.17■□□□□ 0.66
CACNB3-220ENST00000551716 UTYO14607 1347 aa19.17■□□□□ 0.66
CACNB3-220ENST00000551716 TRIM75PA6NK02 468 aa19.16■□□□□ 0.66
CACNB3-220ENST00000551716 POTEB2H3BUK9 544 aa19.16■□□□□ 0.66
CACNB3-220ENST00000551716 NBPF7P0C2Y1 421 aaPredicted RBP19.16■□□□□ 0.66
CACNB3-220ENST00000551716 SLC5A1P13866 664 aa19.16■□□□□ 0.66
CACNB3-220ENST00000551716 PROCA1Q8NCQ7 364 aaPredicted RBP19.16■□□□□ 0.66
CACNB3-220ENST00000551716 LPIN2Q92539 896 aa19.16■□□□□ 0.66
CACNB3-220ENST00000551716 BICC1Q9H694 974 aaKnown RBP19.16■□□□□ 0.66
CACNB3-220ENST00000551716 GJD2Q9UKL4 321 aa19.16■□□□□ 0.66
CACNB3-220ENST00000551716 UNC80Q8N2C7 3258 aa19.15■□□□□ 0.66
CACNB3-220ENST00000551716 EXOSC9Q06265 439 aaKnown RBP19.15■□□□□ 0.66
CACNB3-220ENST00000551716 WDR63Q8IWG1 891 aa19.15■□□□□ 0.66
CACNB3-220ENST00000551716 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
CACNB3-220ENST00000551716 SPINK5Q9NQ38 1064 aaPredicted RBP19.15■□□□□ 0.66
CACNB3-220ENST00000551716 RGS3P49796 1198 aa19.14■□□□□ 0.65
CACNB3-220ENST00000551716 TRMT44Q8IYL2 757 aaKnown RBP19.14■□□□□ 0.65
CACNB3-220ENST00000551716 TBC1D2Q9BYX2 928 aa19.14■□□□□ 0.65
CACNB3-220ENST00000551716 ATRNL1Q5VV63 1379 aa19.14■□□□□ 0.65
CACNB3-220ENST00000551716 SLF2Q8IX21 1173 aa19.13■□□□□ 0.65
CACNB3-220ENST00000551716 SALL1Q9NSC2 1324 aa19.12■□□□□ 0.65
CACNB3-220ENST00000551716 TBC1D12O60347 775 aa19.12■□□□□ 0.65
CACNB3-220ENST00000551716 XRCC5P13010 732 aaKnown RBP19.12■□□□□ 0.65
CACNB3-220ENST00000551716 PRDX5P30044 214 aa19.12■□□□□ 0.65
CACNB3-220ENST00000551716 ZGPATQ8N5A5 531 aaKnown RBP19.12■□□□□ 0.65
CACNB3-220ENST00000551716 SEMA3EO15041 775 aa19.11■□□□□ 0.65
CACNB3-220ENST00000551716 TREML2Q5T2D2 321 aa19.11■□□□□ 0.65
CACNB3-220ENST00000551716 MAP3K21Q5TCX8 1036 aa19.11■□□□□ 0.65
CACNB3-220ENST00000551716 ANKRD44Q8N8A2 993 aa19.11■□□□□ 0.65
CACNB3-220ENST00000551716 GUCD1Q96NT3 240 aa19.11■□□□□ 0.65
CACNB3-220ENST00000551716 LBHD1Q9BQE6 289 aaPredicted RBP19.11■□□□□ 0.65
CACNB3-220ENST00000551716 DENND2AQ9ULE3 1009 aa19.11■□□□□ 0.65
CACNB3-220ENST00000551716 AK9Q5TCS8 1911 aa19.11■□□□□ 0.65
CACNB3-220ENST00000551716 EYA2O00167 538 aa19.1■□□□□ 0.65
CACNB3-220ENST00000551716 COL6A1P12109 1028 aa19.1■□□□□ 0.65
CACNB3-220ENST00000551716 ZNF280CQ8ND82 737 aa19.1■□□□□ 0.65
CACNB3-220ENST00000551716 PRDM6Q9NQX0 595 aa19.1■□□□□ 0.65
CACNB3-220ENST00000551716 PFASO15067 1338 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 PRKAR2AP13861 404 aaKnown RBP19.09■□□□□ 0.65
CACNB3-220ENST00000551716 MDM2Q00987 491 aaPredicted RBP19.09■□□□□ 0.65
CACNB3-220ENST00000551716 TRIM32Q13049 653 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 SPP2Q13103 211 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 SH3BP5LQ7L8J4 393 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 SOCS4Q8WXH5 440 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 NUDT12Q9BQG2 462 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 MORF4L1Q9UBU8 362 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 ALPK3Q96L96 1907 aa19.09■□□□□ 0.65
CACNB3-220ENST00000551716 DDTLA6NHG4 134 aaPredicted RBP19.08■□□□□ 0.64
CACNB3-220ENST00000551716 ZBTB22O15209 634 aa19.08■□□□□ 0.64
CACNB3-220ENST00000551716 ZNF697Q5TEC3 545 aa19.08■□□□□ 0.64
CACNB3-220ENST00000551716 KLHDC4Q8TBB5 520 aa19.08■□□□□ 0.64
CACNB3-220ENST00000551716 TRIB2Q92519 343 aa19.08■□□□□ 0.64
CACNB3-220ENST00000551716 FAM163AQ96GL9 167 aaPredicted RBP19.08■□□□□ 0.64
CACNB3-220ENST00000551716 OSBPL5Q9H0X9 879 aaPredicted RBP19.08■□□□□ 0.64
CACNB3-220ENST00000551716 ASCC2Q9H1I8 757 aaPredicted RBP19.08■□□□□ 0.64
CACNB3-220ENST00000551716 GAKO14976 1311 aa19.07■□□□□ 0.64
CACNB3-220ENST00000551716 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
CACNB3-220ENST00000551716 CYP2B6P20813 491 aa19.07■□□□□ 0.64
CACNB3-220ENST00000551716 SYMPKQ92797 1274 aaKnown RBP19.07■□□□□ 0.64
CACNB3-220ENST00000551716 FBXO3Q9UK99 471 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms