RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485		A0A0C4DFX4	3053 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485		A0A1W2PPC1	479 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	INHA	P05111	366 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	ELN	P15502	786 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	CAPN2	P17655	700 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	PTPRA	P18433	802 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	IRF5	Q13568	498 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	GADL1	Q6ZQY3	521 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	ATG9A	Q7Z3C6	839 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	PXYLP1	Q8TE99	480 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	IDI2	Q9BXS1	227 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	ZHX2	Q9Y6X8	837 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	MYH2	Q9UKX2	1941 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	DOCK3	Q8IZD9	2030 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	RFX7	Q2KHR2	1363 aa		13.28	□□□□□ -0.28
PFKM-223	ENST00000551485	DOCK1	Q14185	1865 aa		13.27	□□□□□ -0.28
PFKM-223	ENST00000551485	TNPO2	O14787	897 aa	Known RBP	13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	EVI5	O60447	810 aa		13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	ENTPD3	O75355	529 aa		13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	RGS3	P49796	1198 aa		13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	ATP2B3	Q16720	1220 aa		13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	GNL3L	Q9NVN8	582 aa	Known RBP	13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	AFG3L2	Q9Y4W6	797 aa		13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	PHIP	Q8WWQ0	1821 aa		13.27	□□□□□ -0.29
PFKM-223	ENST00000551485	GAK	O14976	1311 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	SEMA3E	O15041	775 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	TFRC	P02786	760 aa	Known RBP	13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	SH3BP5L	Q7L8J4	393 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	ZNF521	Q96K83	1311 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	ALPK3	Q96L96	1907 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	DEFB118	Q96PH6	123 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	PAK6	Q9NQU5	681 aa	Predicted RBP	13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	FBXO3	Q9UK99	471 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	DENND2A	Q9ULE3	1009 aa		13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	LRRFIP2	Q9Y608	721 aa	Known RBP	13.26	□□□□□ -0.29
PFKM-223	ENST00000551485	SOX1	O00570	391 aa	Predicted RBP	13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	ZBTB22	O15209	634 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	CIAO1	O76071	339 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	PHKA1	P46020	1223 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	MAP3K10	Q02779	954 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	SLC17A8	Q8NDX2	589 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	CRISPLD2	Q9H0B8	497 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	SIL1	Q9H173	461 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	CEP126	Q9P2H0	1117 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	CUL9	Q8IWT3	2517 aa		13.25	□□□□□ -0.29
PFKM-223	ENST00000551485	DDTL	A6NHG4	134 aa	Predicted RBP	13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	TRIM75P	A6NK02	468 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	ANP32C	O43423	234 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	CTNND1	O60716	968 aa	Known RBP	13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	SLURP2	P0DP57	97 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	ZGPAT	Q8N5A5	531 aa	Known RBP	13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	SSH1	Q8WYL5	1049 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	COA7	Q96BR5	231 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	LRCH3	Q96II8	777 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	DDX4	Q9NQI0	724 aa	Known RBP	13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	STAP2	Q9UGK3	403 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	TAOK2	Q9UL54	1235 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	AGTPBP1	Q9UPW5	1226 aa		13.24	□□□□□ -0.29
PFKM-223	ENST00000551485	DLL1	O00548	723 aa		13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	FAM110C	Q1W6H9	321 aa		13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	CCDC84	Q86UT8	332 aa	Predicted RBP	13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	DZIP1	Q86YF9	867 aa	Known RBP	13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	FAM9B	Q8IZU0	186 aa		13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	ANKRD13C	Q8N6S4	541 aa		13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	PAWR	Q96IZ0	340 aa	Known RBP	13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	PNMA3	Q9UL41	463 aa		13.23	□□□□□ -0.29
PFKM-223	ENST00000551485	UBTFL1	P0CB47	393 aa	Predicted RBP	13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	ADORA1	P30542	326 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	PICALM	Q13492	652 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	RASGRF1	Q13972	1273 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	TREML2	Q5T2D2	321 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	CCDC102B	Q68D86	513 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	NECAB2	Q7Z6G3	386 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	SLF2	Q8IX21	1173 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	DIS3L	Q8TF46	1054 aa	Known RBP	13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	FAM163A	Q96GL9	167 aa	Predicted RBP	13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	LOC285556	D6RIA3	1793 aa		13.22	□□□□□ -0.29
PFKM-223	ENST00000551485	MROH7-TTC4	A0A0A0MT08	1334 aa		13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	PDS5A	Q29RF7	1337 aa	Known RBP	13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	TBC1D12	O60347	775 aa		13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	IL15	P40933	162 aa	Predicted RBP	13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	BTD	P43251	543 aa		13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	GDF15	Q99988	308 aa		13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	ABCF2	Q9UG63	623 aa		13.21	□□□□□ -0.29
PFKM-223	ENST00000551485	HMGCR	P04035	888 aa		13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	BMP8B	P34820	402 aa		13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	GCLC	P48506	637 aa	Predicted RBP	13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	RHBDL3	P58872	404 aa		13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	C7orf61	Q8IZ16	206 aa		13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	ANKLE1	Q8NAG6	615 aa		13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	PA2G4	Q9UQ80	394 aa	Known RBP	13.2	□□□□□ -0.3
PFKM-223	ENST00000551485	ATAD5	Q96QE3	1844 aa		13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	GPR75-ASB3	A0A0A6YYF3	556 aa		13.19	□□□□□ -0.3
PFKM-223	ENST00000551485	FAM196B	A6NMK8	535 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms