RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 FZD9O00144 591 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 MYL6BP14649 208 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 ECE1P42892 770 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 CCT4P50991 539 aaKnown RBP7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 HLFQ16534 295 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 PROSER3Q2NL68 480 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 SH3D19Q5HYK7 790 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 B4GALNT3Q6L9W6 998 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 NIM1KQ8IY84 436 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 SUPT20HQ8NEM7 779 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 SLC10A4Q96EP9 437 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 NLRP3Q96P20 1036 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 VPS33BQ9H267 617 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 PGPEP1Q9NXJ5 209 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 MAP3K15Q6ZN16 1313 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 PASKQ96RG2 1323 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 COL11A2P13942 1736 aaPredicted RBP7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 F6X3S4 739 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 FOXN1O15353 648 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 AP1G2O75843 785 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 DDX58O95786 925 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 ANXA1P04083 346 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 PARP10Q53GL7 1025 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 MAP1SQ66K74 1059 aaPredicted RBP7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 NBPF10Q6P3W6 841 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 KSR2Q6VAB6 950 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 Q6ZVU0 165 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 USP50Q70EL3 339 aaPredicted RBP7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 LRP10Q7Z4F1 713 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 GPR161Q8N6U8 529 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 EPS8L1Q8TE68 723 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 AGBL1Q96MI9 1066 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 CRAMP1Q96RY5 1269 aa7.71□□□□□ -1.18
DEPDC4-209ENST00000550587 LAMB4A4D0S4 1761 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 PI4KAP2A4QPH2 592 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 RASSF10A6NK89 507 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 PPIP5K2O43314 1243 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 GPTP24298 496 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 HOXA10P31260 410 aaPredicted RBP7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 LBX1P52954 281 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 MLLT1Q03111 559 aaPredicted RBP7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 PTSQ03393 145 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 CRY2Q49AN0 593 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 HSP90AB3PQ58FF7 597 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 INTS6LQ5JSJ4 861 aaKnown RBP7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 SLC4A10Q6U841 1118 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 COPS6Q7L5N1 327 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 PI4KAP1Q8N8J0 262 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 DNAAF4Q8WXU2 420 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 WDR33Q9C0J8 1336 aaKnown RBP7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 ZNF541Q9H0D2 1346 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 PCNTO95613 3336 aa7.7□□□□□ -1.18
DEPDC4-209ENST00000550587 SPINT1O43278 529 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 ALDH1L1O75891 902 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 BBOX1O75936 387 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 GRM1Q13255 1194 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 BEND3Q5T5X7 828 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 OLFM4Q6UX06 510 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 XAGE3Q8WTP9 111 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 UTP14AQ9BVJ6 771 aaKnown RBP7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 RWDD1Q9H446 243 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 ADARB2Q9NS39 739 aaKnown RBP7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 MAP3K2Q9Y2U5 619 aa7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 IBTKQ9P2D0 1353 aaPredicted RBP7.69□□□□□ -1.18
DEPDC4-209ENST00000550587 GNAI3P08754 354 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 RELBQ01201 579 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 KRT76Q01546 638 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 PTK2Q05397 1052 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 AIMP1Q12904 312 aaKnown RBP7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 TNIP1Q15025 636 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 SUSD4Q5VX71 490 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 DDX46Q7L014 1031 aaKnown RBP7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 CENPQQ7L2Z9 268 aaPredicted RBP7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 ZNF34Q8IZ26 560 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 LINS1Q8NG48 757 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 PLBD2Q8NHP8 589 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 ADAM32Q8TC27 787 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 DDRGK1Q96HY6 314 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 GPR101Q96P66 508 aaPredicted RBP7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 SRCIN1Q9C0H9 1055 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 USP44Q9H0E7 712 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 HMX1Q9NP08 348 aaPredicted RBP7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 TMPRSS4Q9NRS4 437 aa7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 CDV3Q9UKY7 258 aaKnown RBP7.68□□□□□ -1.18
DEPDC4-209ENST00000550587 NUP98P52948 1817 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 H7C1D1 291 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 CA12O43570 354 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 IGHDP01880 384 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 MAP2K2P36507 400 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 EPS15P42566 896 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 CTSOP43234 321 aaPredicted RBP7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 RAB15P59190 212 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 DHX9Q08211 1270 aaKnown RBP7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 NEXNQ0ZGT2 675 aa7.67□□□□□ -1.18
DEPDC4-209ENST00000550587 HDAC1Q13547 482 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms