RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 CEP135Q66GS9 1140 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 MICALL1Q8N3F8 863 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 ZBTB38Q8NAP3 1195 aaPredicted RBP6.5□□□□□ -1.37
TMEM116-211ENST00000550233 C8orf48Q96LL4 319 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 ADAM19Q9H013 955 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 STRN4Q9NRL3 753 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 GMIPQ9P107 970 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 SOX13Q9UN79 622 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
TMEM116-211ENST00000550233 SNCAIPQ9Y6H5 919 aa6.5□□□□□ -1.37
TMEM116-211ENST00000550233 KCNQ2O43526 872 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 PRC1O43663 620 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 EIF3JO75822 258 aaKnown RBP6.49□□□□□ -1.37
TMEM116-211ENST00000550233 HTR3BO95264 441 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 MYCLP1P12525 358 aaPredicted RBP6.49□□□□□ -1.37
TMEM116-211ENST00000550233 CPEP16870 476 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 EIF2AK2P19525 551 aaKnown RBP6.49□□□□□ -1.37
TMEM116-211ENST00000550233 CABP4P57796 275 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 ZNF423Q2M1K9 1284 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 PERM1Q5SV97 790 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 RASIP1Q5U651 963 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 WWC2Q6AWC2 1192 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 KANK3Q6NY19 840 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 IPO9Q96P70 1041 aaKnown RBP6.49□□□□□ -1.37
TMEM116-211ENST00000550233 SLC30A3Q99726 388 aa6.49□□□□□ -1.37
TMEM116-211ENST00000550233 J3QW42 95 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 BNIP3LO60238 219 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 ZNF143P52747 638 aaPredicted RBP6.48□□□□□ -1.37
TMEM116-211ENST00000550233 ATP11AP98196 1134 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 PDE4BQ07343 736 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 UBAP2LQ14157 1087 aaKnown RBP6.48□□□□□ -1.37
TMEM116-211ENST00000550233 BBS9Q3SYG4 887 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 VHLLQ6RSH7 139 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 RUFY4Q6ZNE9 571 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 HDXQ7Z353 690 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 VN1R5Q7Z5H4 357 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 THNSL2Q86YJ6 484 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 CCDC146Q8IYE0 955 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 TRIM22Q8IYM9 498 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 GRIN3AQ8TCU5 1115 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 KIF2CQ99661 725 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 RUSC1Q9BVN2 902 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 SOX17Q9H6I2 414 aaPredicted RBP6.48□□□□□ -1.37
TMEM116-211ENST00000550233 KRT82Q9NSB4 513 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 PRR12Q9ULL5 1215 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 MAPRE3Q9UPY8 281 aa6.48□□□□□ -1.37
TMEM116-211ENST00000550233 SENP3-EIF4A1A0A087X0R7 540 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 B2RBV5 119 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 KIF3BO15066 747 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 SUSD5O60279 629 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 GRIN3BO60391 1043 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 MAP4K4O95819 1239 aaPredicted RBP6.47□□□□□ -1.37
TMEM116-211ENST00000550233 GSTP1P09211 210 aaKnown RBP6.47□□□□□ -1.37
TMEM116-211ENST00000550233 FAM153BP0C7A2 387 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 ESRRAP11474 423 aaPredicted RBP6.47□□□□□ -1.37
TMEM116-211ENST00000550233 EPHB1P54762 984 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 IKBKEQ14164 716 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 SLC10A6Q3KNW5 377 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 FNDC3BQ53EP0 1204 aaKnown RBP6.47□□□□□ -1.37
TMEM116-211ENST00000550233 MRM1Q6IN84 353 aaKnown RBP6.47□□□□□ -1.37
TMEM116-211ENST00000550233 CCSAPQ6IQ19 270 aaPredicted RBP6.47□□□□□ -1.37
TMEM116-211ENST00000550233 PDZD3Q86UT5 571 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 DNAJB12Q9NXW2 375 aaKnown RBP6.47□□□□□ -1.37
TMEM116-211ENST00000550233 CACNA2D2Q9NY47 1150 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 DNMT3LQ9UJW3 386 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 EID1Q9Y6B2 187 aa6.47□□□□□ -1.37
TMEM116-211ENST00000550233 UPK3BL1B0FP48 263 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 ZBTB42B2RXF5 422 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 UPK3BL2E5RIL1 263 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 PLD2O14939 933 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 ADCY3O60266 1144 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 MAN1A2O60476 641 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 AVPP01185 164 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 CYP11A1P05108 521 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 NME1P15531 152 aaKnown RBP6.46□□□□□ -1.38
TMEM116-211ENST00000550233 CD33P20138 364 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 TBX4P57082 545 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 NFKB2Q00653 900 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 MLLT1Q03111 559 aaPredicted RBP6.46□□□□□ -1.38
TMEM116-211ENST00000550233 CDCP2Q5VXM1 449 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 UNC5AQ6ZN44 842 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 NLRC3Q7RTR2 1065 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 DHX37Q8IY37 1157 aaKnown RBP6.46□□□□□ -1.38
TMEM116-211ENST00000550233 EXOC8Q8IYI6 725 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 STK35Q8TDR2 534 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 ABHD17AQ96GS6 310 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 UBE2OQ9C0C9 1292 aaKnown RBP6.46□□□□□ -1.38
TMEM116-211ENST00000550233 INTS7Q9NVH2 962 aaKnown RBP6.46□□□□□ -1.38
TMEM116-211ENST00000550233 DACH1Q9UI36 760 aa6.46□□□□□ -1.38
TMEM116-211ENST00000550233 GFRA2O00451 464 aa6.45□□□□□ -1.38
TMEM116-211ENST00000550233 TNFRSF10CO14798 259 aa6.45□□□□□ -1.38
TMEM116-211ENST00000550233 SIN3BO75182 1162 aa6.45□□□□□ -1.38
TMEM116-211ENST00000550233 THBS1P07996 1170 aa6.45□□□□□ -1.38
TMEM116-211ENST00000550233 FGFR3P22607 806 aa6.45□□□□□ -1.38
TMEM116-211ENST00000550233 CCNFP41002 786 aa6.45□□□□□ -1.38
TMEM116-211ENST00000550233 SMCPP49901 116 aaPredicted RBP6.45□□□□□ -1.38
TMEM116-211ENST00000550233 CDKN1CP49918 316 aaPredicted RBP6.45□□□□□ -1.38
TMEM116-211ENST00000550233 SLC7A5Q01650 507 aa6.45□□□□□ -1.38
TMEM116-211ENST00000550233 PABPC4Q13310 644 aaKnown RBP eCLIP6.45□□□□□ -1.38
TMEM116-211ENST00000550233 HLTFQ14527 1009 aaKnown RBP eCLIP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms