RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 ATRNL1Q5VV63 1379 aa19.32■□□□□ 0.68
TCHP-208ENST00000549550 A0A0G2JLL6 359 aaPredicted RBP19.31■□□□□ 0.68
TCHP-208ENST00000549550 EYA2O00167 538 aa19.31■□□□□ 0.68
TCHP-208ENST00000549550 SGPL1O95470 568 aa19.31■□□□□ 0.68
TCHP-208ENST00000549550 LDHBP07195 334 aaKnown RBP19.31■□□□□ 0.68
TCHP-208ENST00000549550 NEFLP07196 543 aa19.31■□□□□ 0.68
TCHP-208ENST00000549550 ELNP15502 786 aa19.31■□□□□ 0.68
TCHP-208ENST00000549550 FASTKD5Q7L8L6 764 aaKnown RBP19.31■□□□□ 0.68
TCHP-208ENST00000549550 PRRT2Q7Z6L0 340 aaPredicted RBP19.31■□□□□ 0.68
TCHP-208ENST00000549550 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
TCHP-208ENST00000549550 USP44Q9H0E7 712 aa19.31■□□□□ 0.68
TCHP-208ENST00000549550 ZHX2Q9Y6X8 837 aa19.31■□□□□ 0.68
TCHP-208ENST00000549550 PHF20L1A8MW92 1017 aa19.3■□□□□ 0.68
TCHP-208ENST00000549550 RFX5P48382 616 aaPredicted RBP19.3■□□□□ 0.68
TCHP-208ENST00000549550 FLT3LGP49771 235 aa19.3■□□□□ 0.68
TCHP-208ENST00000549550 GADL1Q6ZQY3 521 aa19.3■□□□□ 0.68
TCHP-208ENST00000549550 SCYL3Q8IZE3 742 aa19.3■□□□□ 0.68
TCHP-208ENST00000549550 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
TCHP-208ENST00000549550 PICK1Q9NRD5 415 aa19.3■□□□□ 0.68
TCHP-208ENST00000549550 PTPRCP08575 1304 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 EVI5O60447 810 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 INHAP05111 366 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 PTPRAP18433 802 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 SLFN5Q08AF3 891 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 ERICH6BQ5W0A0 696 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 ATG9AQ7Z3C6 839 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 AFG3L2Q9Y4W6 797 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 ATAD5Q96QE3 1844 aa19.29■□□□□ 0.68
TCHP-208ENST00000549550 TNPO2O14787 897 aaKnown RBP19.28■□□□□ 0.68
TCHP-208ENST00000549550 RGS3P49796 1198 aa19.28■□□□□ 0.68
TCHP-208ENST00000549550 DEFB118Q96PH6 123 aa19.28■□□□□ 0.68
TCHP-208ENST00000549550 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
TCHP-208ENST00000549550 SALL1Q9NSC2 1324 aa19.27■□□□□ 0.68
TCHP-208ENST00000549550 A0A1W2PPC1 479 aa19.27■□□□□ 0.68
TCHP-208ENST00000549550 TFRCP02786 760 aaKnown RBP19.27■□□□□ 0.68
TCHP-208ENST00000549550 ATP2B3Q16720 1220 aa19.27■□□□□ 0.68
TCHP-208ENST00000549550 SLC17A8Q8NDX2 589 aa19.27■□□□□ 0.68
TCHP-208ENST00000549550 PXYLP1Q8TE99 480 aa19.27■□□□□ 0.68
TCHP-208ENST00000549550 SMCR8Q8TEV9 937 aaPredicted RBP19.27■□□□□ 0.68
TCHP-208ENST00000549550 GNL3LQ9NVN8 582 aaKnown RBP19.27■□□□□ 0.68
TCHP-208ENST00000549550 SLC45A1Q9Y2W3 748 aa19.27■□□□□ 0.68
TCHP-208ENST00000549550 SOX1O00570 391 aaPredicted RBP19.26■□□□□ 0.67
TCHP-208ENST00000549550 ENTPD3O75355 529 aa19.26■□□□□ 0.67
TCHP-208ENST00000549550 IRF5Q13568 498 aa19.26■□□□□ 0.67
TCHP-208ENST00000549550 SH3BP5LQ7L8J4 393 aa19.26■□□□□ 0.67
TCHP-208ENST00000549550 ZSCAN29Q8IWY8 852 aaPredicted RBP19.26■□□□□ 0.67
TCHP-208ENST00000549550 IDI2Q9BXS1 227 aa19.26■□□□□ 0.67
TCHP-208ENST00000549550 SIL1Q9H173 461 aa19.26■□□□□ 0.67
TCHP-208ENST00000549550 PAK6Q9NQU5 681 aaPredicted RBP19.26■□□□□ 0.67
TCHP-208ENST00000549550 LRRFIP2Q9Y608 721 aaKnown RBP19.26■□□□□ 0.67
TCHP-208ENST00000549550 RFX7Q2KHR2 1363 aa19.26■□□□□ 0.67
TCHP-208ENST00000549550 LOC285556D6RIA3 1793 aa19.26■□□□□ 0.67
TCHP-208ENST00000549550 DLL1O00548 723 aa19.25■□□□□ 0.67
TCHP-208ENST00000549550 SLURP2P0DP57 97 aa19.25■□□□□ 0.67
TCHP-208ENST00000549550 PHKA1P46020 1223 aa19.25■□□□□ 0.67
TCHP-208ENST00000549550 TAOK2Q9UL54 1235 aa19.25■□□□□ 0.67
TCHP-208ENST00000549550 DENND2AQ9ULE3 1009 aa19.25■□□□□ 0.67
TCHP-208ENST00000549550 DDTLA6NHG4 134 aaPredicted RBP19.24■□□□□ 0.67
TCHP-208ENST00000549550 TRIM75PA6NK02 468 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 SEMA3EO15041 775 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 CT47B1P0C2W7 299 aaPredicted RBP19.24■□□□□ 0.67
TCHP-208ENST00000549550 CAPN2P17655 700 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 MAP3K10Q02779 954 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 LRCH3Q96II8 777 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 PAWRQ96IZ0 340 aaKnown RBP19.24■□□□□ 0.67
TCHP-208ENST00000549550 CEP126Q9P2H0 1117 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.24■□□□□ 0.67
TCHP-208ENST00000549550 STAP2Q9UGK3 403 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 GAKO14976 1311 aa19.24■□□□□ 0.67
TCHP-208ENST00000549550 CTNND1O60716 968 aaKnown RBP19.23■□□□□ 0.67
TCHP-208ENST00000549550 CIAO1O76071 339 aa19.23■□□□□ 0.67
TCHP-208ENST00000549550 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
TCHP-208ENST00000549550 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
TCHP-208ENST00000549550 COA7Q96BR5 231 aa19.23■□□□□ 0.67
TCHP-208ENST00000549550 CRISPLD2Q9H0B8 497 aa19.23■□□□□ 0.67
TCHP-208ENST00000549550 AGTPBP1Q9UPW5 1226 aa19.23■□□□□ 0.67
TCHP-208ENST00000549550 DDX60LQ5H9U9 1706 aaKnown RBP19.22■□□□□ 0.67
TCHP-208ENST00000549550 PICALMQ13492 652 aa19.22■□□□□ 0.67
TCHP-208ENST00000549550 CCDC84Q86UT8 332 aaPredicted RBP19.22■□□□□ 0.67
TCHP-208ENST00000549550 DZIP1Q86YF9 867 aaKnown RBP19.22■□□□□ 0.67
TCHP-208ENST00000549550 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
TCHP-208ENST00000549550 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
TCHP-208ENST00000549550 DDX4Q9NQI0 724 aaKnown RBP19.22■□□□□ 0.67
TCHP-208ENST00000549550 FBXO3Q9UK99 471 aa19.22■□□□□ 0.67
TCHP-208ENST00000549550 PLXNB2O15031 1838 aa19.22■□□□□ 0.67
TCHP-208ENST00000549550 TREML2Q5T2D2 321 aa19.21■□□□□ 0.67
TCHP-208ENST00000549550 DIS3LQ8TF46 1054 aaKnown RBP19.21■□□□□ 0.67
TCHP-208ENST00000549550 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.21■□□□□ 0.67
TCHP-208ENST00000549550 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
TCHP-208ENST00000549550 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
TCHP-208ENST00000549550 CUL9Q8IWT3 2517 aa19.21■□□□□ 0.67
TCHP-208ENST00000549550 ADORA1P30542 326 aa19.2■□□□□ 0.66
TCHP-208ENST00000549550 BTDP43251 543 aa19.2■□□□□ 0.66
TCHP-208ENST00000549550 FAM110CQ1W6H9 321 aa19.2■□□□□ 0.66
TCHP-208ENST00000549550 CCDC102BQ68D86 513 aa19.2■□□□□ 0.66
TCHP-208ENST00000549550 NECAB2Q7Z6G3 386 aa19.2■□□□□ 0.66
TCHP-208ENST00000549550 ABCF2Q9UG63 623 aa19.2■□□□□ 0.66
TCHP-208ENST00000549550 PNMA3Q9UL41 463 aa19.2■□□□□ 0.66
TCHP-208ENST00000549550 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
TCHP-208ENST00000549550 IL15P40933 162 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms