RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 TFF2Q03403 129 aa10.65□□□□□ -0.7
SMARCD1-207ENST00000549526 FAM110CQ1W6H9 321 aa10.65□□□□□ -0.7
SMARCD1-207ENST00000549526 PRRT2Q7Z6L0 340 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-207ENST00000549526 C11orf16Q9NQ32 467 aa10.65□□□□□ -0.7
SMARCD1-207ENST00000549526 CXXC1Q9P0U4 656 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-207ENST00000549526 WDFY4Q6ZS81 3184 aa10.65□□□□□ -0.7
SMARCD1-207ENST00000549526 PLXNB2O15031 1838 aa10.64□□□□□ -0.71
SMARCD1-207ENST00000549526 ITGA6P23229 1130 aa10.64□□□□□ -0.71
SMARCD1-207ENST00000549526 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
SMARCD1-207ENST00000549526 KCNQ1P51787 676 aa10.64□□□□□ -0.71
SMARCD1-207ENST00000549526 NHLH1Q02575 133 aa10.64□□□□□ -0.71
SMARCD1-207ENST00000549526 FRMPD3Q5JV73 1810 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 PPP2R1AP30153 589 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 NOL9Q5SY16 702 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 TEKT1Q969V4 418 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 PICK1Q9NRD5 415 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 PLXNA1Q9UIW2 1896 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
SMARCD1-207ENST00000549526 MAPK8IP3Q9UPT6 1336 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 XRCC5P13010 732 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 ZKSCAN1P17029 563 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 GCLCP48506 637 aaPredicted RBP10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 FOXK2Q01167 660 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 DDX10Q13206 875 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 ADGRE1Q14246 886 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 FKBP1CQ5VVH2 108 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 SLC39A5Q6ZMH5 540 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 CCDC129Q6ZRS4 1044 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 SH3RF1Q7Z6J0 888 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 UIMC1Q96RL1 719 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 NUDT12Q9BQG2 462 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 PHAXQ9H814 394 aaKnown RBP10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 AFG3L2Q9Y4W6 797 aa10.62□□□□□ -0.71
SMARCD1-207ENST00000549526 PTPRFP10586 1907 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 TRIM75PA6NK02 468 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 PLIN1O60240 522 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 PTPRAP18433 802 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 EPHB4P54760 987 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 RIPK4P57078 832 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 TCP10Q12799 353 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 MICALL1Q8N3F8 863 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 TDRD7Q8NHU6 1098 aaKnown RBP10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 FAM151AQ8WW52 585 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 KHSRPQ92945 711 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 METTL22Q9BUU2 404 aaPredicted RBP10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 AGTPBP1Q9UPW5 1226 aa10.61□□□□□ -0.71
SMARCD1-207ENST00000549526 RLFQ13129 1914 aa10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 PRR33A8MZF0 331 aa10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 DNM1LO00429 736 aa10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 CNGA1P29973 690 aa10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 GRIK5Q16478 980 aa10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 ZDHHC15Q96MV8 337 aa10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 PNNQ9H307 717 aaKnown RBP10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 PDLIM7Q9NR12 457 aa10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 RPAP1Q9BWH6 1393 aaPredicted RBP10.6□□□□□ -0.71
SMARCD1-207ENST00000549526 PI4K2BG5E9Z4 385 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 CHL1O00533 1208 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 HOXB7P09629 217 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 HIBADHP31937 336 aaKnown RBP10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 PBX2P40425 430 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 CCL14Q16627 93 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 TRIM60Q495X7 471 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 TREML2Q5T2D2 321 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 SCYL3Q8IZE3 742 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 LPAR1Q92633 364 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 CFAP54Q96N23 3096 aa10.59□□□□□ -0.71
SMARCD1-207ENST00000549526 ANKRD18BA2A2Z9 1011 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 DDX58O95786 925 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 ITGB8P26012 769 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 GYG1P46976 350 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 FPGSQ05932 587 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 APOBEC3HQ6NTF7 200 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 UBE3BQ7Z3V4 1068 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 FBXL18Q96ME1 805 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 PBX4Q9BYU1 374 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 DDX20Q9UHI6 824 aaKnown RBP10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 TACC3Q9Y6A5 838 aa10.58□□□□□ -0.72
SMARCD1-207ENST00000549526 A0A1B0GUL6 1792 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 GRXCR1A8MXD5 290 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 MSCO60682 206 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 FRAT2O75474 233 aaPredicted RBP10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 MYCNP04198 464 aaPredicted RBP10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 RAG1P15918 1043 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 CHAF1AQ13111 956 aaPredicted RBP10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 DUSP27Q5VZP5 1158 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 ARRDC4Q8NCT1 418 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 MAP3K2Q9Y2U5 619 aa10.57□□□□□ -0.72
SMARCD1-207ENST00000549526 LRRFIP2Q9Y608 721 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms