RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 IGF2-ASQ6U949 168 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.38
PTCH1-216ENST00000548379 SHDQ96IW2 340 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 SUGCTQ9HAC7 445 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 ZNRF3Q9ULT6 936 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 ZNF165P49910 485 aa6.39□□□□□ -1.39
PTCH1-216ENST00000548379 TRIM28Q13263 835 aaKnown RBP6.39□□□□□ -1.39
PTCH1-216ENST00000548379 PDE3AQ14432 1141 aa6.39□□□□□ -1.39
PTCH1-216ENST00000548379 DUOXA2Q1HG44 320 aa6.39□□□□□ -1.39
PTCH1-216ENST00000548379 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
PTCH1-216ENST00000548379 DIEXFQ68CQ4 756 aaKnown RBP6.39□□□□□ -1.39
PTCH1-216ENST00000548379 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.39□□□□□ -1.39
PTCH1-216ENST00000548379 TMEM130Q8N3G9 435 aa6.39□□□□□ -1.39
PTCH1-216ENST00000548379 ZSCAN1Q8NBB4 408 aa6.39□□□□□ -1.39
PTCH1-216ENST00000548379 RBBP8NLQ8NC74 664 aaPredicted RBP6.39□□□□□ -1.39
PTCH1-216ENST00000548379 PLPPR2Q96GM1 343 aa6.39□□□□□ -1.39
PTCH1-216ENST00000548379 MRPL18Q9H0U6 180 aaKnown RBP6.39□□□□□ -1.39
PTCH1-216ENST00000548379 TMPRSS2O15393 492 aa6.38□□□□□ -1.39
PTCH1-216ENST00000548379 GTF2F1P35269 517 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 HNRNPUQ00839 825 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 CLCQ05315 142 aa6.38□□□□□ -1.39
PTCH1-216ENST00000548379 SMG8Q8ND04 991 aaKnown RBP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 ACSBG1Q96GR2 724 aa6.38□□□□□ -1.39
PTCH1-216ENST00000548379 HIRIP3Q9BW71 556 aaPredicted RBP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 GSX1Q9H4S2 264 aaPredicted RBP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 ZNF408Q9H9D4 720 aa6.38□□□□□ -1.39
PTCH1-216ENST00000548379 NOP53Q9NZM5 478 aaKnown RBP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 PPP1R1BQ9UD71 204 aaPredicted RBP6.38□□□□□ -1.39
PTCH1-216ENST00000548379 PPT2Q9UMR5 302 aa6.38□□□□□ -1.39
PTCH1-216ENST00000548379 ADAMTS8Q9UP79 889 aa6.38□□□□□ -1.39
PTCH1-216ENST00000548379 CNTNAP5Q8WYK1 1306 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 LOC105371045A0A1W2PR82 267 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 SLFN14P0C7P3 912 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 NTF4P34130 210 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 GIPRP48546 466 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 ERVK-24P63145 666 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 Q6ZS46 218 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 HDXQ7Z353 690 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 BEND7Q8N7W2 519 aaPredicted RBP6.37□□□□□ -1.39
PTCH1-216ENST00000548379 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 RNF208Q9H0X6 261 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 CRIM1Q9NZV1 1036 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 PPP1R9AQ9ULJ8 1098 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 PCDHB14Q9Y5E9 798 aa6.37□□□□□ -1.39
PTCH1-216ENST00000548379 MEIS3P2A8K0S8 358 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 F8W735 103 aaPredicted RBP6.36□□□□□ -1.39
PTCH1-216ENST00000548379 STK10O94804 968 aaKnown RBP6.36□□□□□ -1.39
PTCH1-216ENST00000548379 HTR3BO95264 441 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 TIAF1O95411 115 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 SSBP05455 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTCH1-216ENST00000548379 IMPDH2P12268 514 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 COL8A1P27658 744 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 ETFBP38117 255 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 ID3Q02535 119 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 TMEM201Q5SNT2 666 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 GK5Q6ZS86 529 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 ACAD11Q709F0 780 aa6.36□□□□□ -1.39
PTCH1-216ENST00000548379 LENG1Q96BZ8 264 aaPredicted RBP6.36□□□□□ -1.39
PTCH1-216ENST00000548379 DCDC2CA8MYV0 355 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 KLF4O43474 513 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 GRIN3BO60391 1043 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 SPATA31C1P0DKV0 1188 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 MCM4P33991 863 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 EIF6P56537 245 aaKnown RBP6.35□□□□□ -1.39
PTCH1-216ENST00000548379 PRRT3Q5FWE3 981 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 ZBTB37Q5TC79 503 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 SOGA3Q5TF21 947 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 NBPF6Q5VWK0 638 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 CCDC81Q6ZN84 652 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 PODNQ7Z5L7 613 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 C12orf40Q86WS4 652 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 FAM169BQ8N8A8 192 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 OR6P1Q8NGX9 317 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 NBPF4Q96M43 638 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 DNAJC2Q99543 621 aaKnown RBP6.35□□□□□ -1.39
PTCH1-216ENST00000548379 LNPKQ9C0E8 428 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 WNT10AQ9GZT5 417 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 DISC1Q9NRI5 854 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 PRKAG3Q9UGI9 489 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 ADAM30Q9UKF2 790 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 HIF3AQ9Y2N7 669 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 CORINQ9Y5Q5 1042 aa6.35□□□□□ -1.39
PTCH1-216ENST00000548379 FANCGO15287 622 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 ADH5P11766 374 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
PTCH1-216ENST00000548379 SERINC3Q13530 473 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 GRIK4Q16099 956 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 SHISA2Q6UWI4 295 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 DPH6Q7L8W6 267 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.39
PTCH1-216ENST00000548379 FANCD2OSQ96PS1 177 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 FERD3LQ96RJ6 166 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 CYP4F12Q9HCS2 524 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 RAD18Q9NS91 495 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 MRVI1Q9Y6F6 885 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 ABCC9O60706 1549 aa6.34□□□□□ -1.39
PTCH1-216ENST00000548379 DNAJA2O60884 412 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms