RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 UTYO14607 1347 aa18.2■□□□□ 0.5
PTPRB-205ENST00000547715 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
PTPRB-205ENST00000547715 A0A0G2JLL6 359 aaPredicted RBP18.19■□□□□ 0.5
PTPRB-205ENST00000547715 CAPN2P17655 700 aa18.19■□□□□ 0.5
PTPRB-205ENST00000547715 MNX1P50219 401 aaPredicted RBP18.19■□□□□ 0.5
PTPRB-205ENST00000547715 IRF5Q13568 498 aa18.19■□□□□ 0.5
PTPRB-205ENST00000547715 PRRT2Q7Z6L0 340 aaPredicted RBP18.19■□□□□ 0.5
PTPRB-205ENST00000547715 ANKRD44Q8N8A2 993 aa18.19■□□□□ 0.5
PTPRB-205ENST00000547715 USP40Q9NVE5 1235 aa18.19■□□□□ 0.5
PTPRB-205ENST00000547715 DOCK1Q14185 1865 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 MYH2Q9UKX2 1941 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 PTPRAP18433 802 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 FGFR2P21802 821 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 PRDX5P30044 214 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 NECAB2Q7Z6G3 386 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 ZFPM1Q8IX07 1006 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 SCYL3Q8IZE3 742 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 PHIPQ8WWQ0 1821 aa18.18■□□□□ 0.5
PTPRB-205ENST00000547715 PHF20L1A8MW92 1017 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 SLC5A1P13866 664 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 C7orf61Q8IZ16 206 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 DEFB123Q8N688 67 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 DIS3LQ8TF46 1054 aaKnown RBP18.17■□□□□ 0.5
PTPRB-205ENST00000547715 COA7Q96BR5 231 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 CRISPLD2Q9H0B8 497 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 SLC45A1Q9Y2W3 748 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 AFG3L2Q9Y4W6 797 aa18.17■□□□□ 0.5
PTPRB-205ENST00000547715 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
PTPRB-205ENST00000547715 ANKRD13CQ8N6S4 541 aa18.16■□□□□ 0.5
PTPRB-205ENST00000547715 LPIN2Q92539 896 aa18.16■□□□□ 0.5
PTPRB-205ENST00000547715 GDF15Q99988 308 aa18.16■□□□□ 0.5
PTPRB-205ENST00000547715 ATRNL1Q5VV63 1379 aa18.16■□□□□ 0.5
PTPRB-205ENST00000547715 TRIM75PA6NK02 468 aa18.15■□□□□ 0.5
PTPRB-205ENST00000547715 BMP8BP34820 402 aa18.15■□□□□ 0.5
PTPRB-205ENST00000547715 RGS3P49796 1198 aa18.15■□□□□ 0.5
PTPRB-205ENST00000547715 GPR153Q6NV75 609 aa18.15■□□□□ 0.5
PTPRB-205ENST00000547715 Q7L0L9 218 aa18.15■□□□□ 0.5
PTPRB-205ENST00000547715 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
PTPRB-205ENST00000547715 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.15■□□□□ 0.5
PTPRB-205ENST00000547715 ZMYND8Q9ULU4 1186 aaPredicted RBP18.15■□□□□ 0.5
PTPRB-205ENST00000547715 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
PTPRB-205ENST00000547715 DDX60LQ5H9U9 1706 aaKnown RBP18.14■□□□□ 0.49
PTPRB-205ENST00000547715 LAMA2P24043 3122 aaKnown RBP18.13■□□□□ 0.49
PTPRB-205ENST00000547715 SYN1P17600 705 aa18.13■□□□□ 0.49
PTPRB-205ENST00000547715 ANKLE1Q8NAG6 615 aa18.13■□□□□ 0.49
PTPRB-205ENST00000547715 AGTPBP1Q9UPW5 1226 aa18.13■□□□□ 0.49
PTPRB-205ENST00000547715 EYA2O00167 538 aa18.12■□□□□ 0.49
PTPRB-205ENST00000547715 CTNND1O60716 968 aaKnown RBP18.12■□□□□ 0.49
PTPRB-205ENST00000547715 ENTPD3O75355 529 aa18.12■□□□□ 0.49
PTPRB-205ENST00000547715 SLURP2P0DP57 97 aa18.12■□□□□ 0.49
PTPRB-205ENST00000547715 CCDC84Q86UT8 332 aaPredicted RBP18.12■□□□□ 0.49
PTPRB-205ENST00000547715 IDI2Q9BXS1 227 aa18.12■□□□□ 0.49
PTPRB-205ENST00000547715 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.12■□□□□ 0.49
PTPRB-205ENST00000547715 HMGCRP04035 888 aa18.11■□□□□ 0.49
PTPRB-205ENST00000547715 FAM110CQ1W6H9 321 aa18.11■□□□□ 0.49
PTPRB-205ENST00000547715 TREML2Q5T2D2 321 aa18.11■□□□□ 0.49
PTPRB-205ENST00000547715 SH3BP5LQ7L8J4 393 aa18.11■□□□□ 0.49
PTPRB-205ENST00000547715 NBPF3Q9H094 633 aa18.11■□□□□ 0.49
PTPRB-205ENST00000547715 HMX1Q9NP08 348 aaPredicted RBP18.11■□□□□ 0.49
PTPRB-205ENST00000547715 GNL3LQ9NVN8 582 aaKnown RBP18.11■□□□□ 0.49
PTPRB-205ENST00000547715 PNMA3Q9UL41 463 aa18.11■□□□□ 0.49
PTPRB-205ENST00000547715 STXBP5LQ9Y2K9 1186 aa18.11■□□□□ 0.49
PTPRB-205ENST00000547715 RPTORQ8N122 1335 aa18.1■□□□□ 0.49
PTPRB-205ENST00000547715 DDTLA6NHG4 134 aaPredicted RBP18.1■□□□□ 0.49
PTPRB-205ENST00000547715 MAP3K10Q02779 954 aa18.1■□□□□ 0.49
PTPRB-205ENST00000547715 LRIT3Q3SXY7 679 aa18.1■□□□□ 0.49
PTPRB-205ENST00000547715 TDHQ8IZJ6 230 aa18.1■□□□□ 0.49
PTPRB-205ENST00000547715 ATAD5Q96QE3 1844 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 SALL1Q9NSC2 1324 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 MAGEA10P43363 369 aaPredicted RBP18.09■□□□□ 0.49
PTPRB-205ENST00000547715 RFX5P48382 616 aaPredicted RBP18.09■□□□□ 0.49
PTPRB-205ENST00000547715 PICALMQ13492 652 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 ATP2B3Q16720 1220 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 ATG9AQ7Z3C6 839 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 USP44Q9H0E7 712 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 MTMR10Q9NXD2 777 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 DENND2AQ9ULE3 1009 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 LOC285556D6RIA3 1793 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 DNAH12Q6ZR08 3092 aa18.09■□□□□ 0.49
PTPRB-205ENST00000547715 VCANP13611 3396 aa18.08■□□□□ 0.49
PTPRB-205ENST00000547715 RFX7Q2KHR2 1363 aa18.08■□□□□ 0.49
PTPRB-205ENST00000547715 TRIM32Q13049 653 aa18.08■□□□□ 0.48
PTPRB-205ENST00000547715 UBE2OQ9C0C9 1292 aaKnown RBP18.08■□□□□ 0.48
PTPRB-205ENST00000547715 SIL1Q9H173 461 aa18.08■□□□□ 0.48
PTPRB-205ENST00000547715 C11orf49Q9H6J7 331 aa18.08■□□□□ 0.48
PTPRB-205ENST00000547715 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
PTPRB-205ENST00000547715 GAKO14976 1311 aa18.07■□□□□ 0.48
PTPRB-205ENST00000547715 PHKA1P46020 1223 aa18.07■□□□□ 0.48
PTPRB-205ENST00000547715 DZIP1Q86YF9 867 aaKnown RBP18.07■□□□□ 0.48
PTPRB-205ENST00000547715 PROCA1Q8NCQ7 364 aaPredicted RBP18.07■□□□□ 0.48
PTPRB-205ENST00000547715 DDX4Q9NQI0 724 aaKnown RBP18.07■□□□□ 0.48
PTPRB-205ENST00000547715 SEMA3EO15041 775 aa18.06■□□□□ 0.48
PTPRB-205ENST00000547715 GCLCP48506 637 aaPredicted RBP18.06■□□□□ 0.48
PTPRB-205ENST00000547715 SPP2Q13103 211 aa18.06■□□□□ 0.48
PTPRB-205ENST00000547715 ZGPATQ8N5A5 531 aaKnown RBP18.06■□□□□ 0.48
PTPRB-205ENST00000547715 CEP126Q9P2H0 1117 aa18.06■□□□□ 0.48
PTPRB-205ENST00000547715 ABCF2Q9UG63 623 aa18.06■□□□□ 0.48
PTPRB-205ENST00000547715 GJD2Q9UKL4 321 aa18.06■□□□□ 0.48
PTPRB-205ENST00000547715 PTPRCP08575 1304 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms