RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SMYD4Q8IYR2 804 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-210ENST00000547654 CCDC74AQ96AQ1 378 aa7.14□□□□□ -1.27
SCAF11-210ENST00000547654 DMRTB1Q96MA1 342 aa7.14□□□□□ -1.27
SCAF11-210ENST00000547654 CCDC86Q9H6F5 360 aaKnown RBP7.14□□□□□ -1.27
SCAF11-210ENST00000547654 DCTN4Q9UJW0 460 aa7.14□□□□□ -1.27
SCAF11-210ENST00000547654 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
SCAF11-210ENST00000547654 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-210ENST00000547654 CD8BP10966 210 aa7.13□□□□□ -1.27
SCAF11-210ENST00000547654 ZNF157P51786 506 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-210ENST00000547654 PRKCQQ04759 706 aa7.13□□□□□ -1.27
SCAF11-210ENST00000547654 IFI16Q16666 785 aaKnown RBP7.13□□□□□ -1.27
SCAF11-210ENST00000547654 WDR89Q96FK6 387 aaPredicted RBP7.13□□□□□ -1.27
SCAF11-210ENST00000547654 FANCD2OSQ96PS1 177 aa7.13□□□□□ -1.27
SCAF11-210ENST00000547654 CSRNP1Q96S65 589 aa7.13□□□□□ -1.27
SCAF11-210ENST00000547654 VAV3Q9UKW4 847 aa7.13□□□□□ -1.27
SCAF11-210ENST00000547654 TRAK1Q9UPV9 953 aa7.13□□□□□ -1.27
SCAF11-210ENST00000547654 IVNS1ABPQ9Y6Y0 642 aa7.13□□□□□ -1.27
SCAF11-210ENST00000547654 CARMIL2Q6F5E8 1435 aa7.12□□□□□ -1.27
SCAF11-210ENST00000547654 RNGTTO60942 597 aaKnown RBP7.12□□□□□ -1.27
SCAF11-210ENST00000547654 RNASE1P07998 156 aaKnown RBP7.12□□□□□ -1.27
SCAF11-210ENST00000547654 KSR1Q8IVT5 923 aa7.12□□□□□ -1.27
SCAF11-210ENST00000547654 PI4K2BQ8TCG2 481 aa7.12□□□□□ -1.27
SCAF11-210ENST00000547654 HRASLS5Q96KN8 279 aa7.12□□□□□ -1.27
SCAF11-210ENST00000547654 MBNL3Q9NUK0 354 aaKnown RBP7.12□□□□□ -1.27
SCAF11-210ENST00000547654 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
SCAF11-210ENST00000547654 CEACAM5P06731 702 aa7.11□□□□□ -1.27
SCAF11-210ENST00000547654 GSTP1P09211 210 aaKnown RBP7.11□□□□□ -1.27
SCAF11-210ENST00000547654 CD96P40200 585 aa7.11□□□□□ -1.27
SCAF11-210ENST00000547654 FMR1Q06787 632 aaKnown RBP eCLIP7.11□□□□□ -1.27
SCAF11-210ENST00000547654 TTLL4Q14679 1199 aa7.11□□□□□ -1.27
SCAF11-210ENST00000547654 ENOX2Q16206 610 aaKnown RBP7.11□□□□□ -1.27
SCAF11-210ENST00000547654 ANGEL2Q5VTE6 544 aaKnown RBP7.11□□□□□ -1.27
SCAF11-210ENST00000547654 PI16Q6UXB8 463 aa7.11□□□□□ -1.27
SCAF11-210ENST00000547654 LRRN4CLQ8ND94 238 aa7.11□□□□□ -1.27
SCAF11-210ENST00000547654 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
SCAF11-210ENST00000547654 GPN3Q9UHW5 284 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-210ENST00000547654 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 ZNF862O60290 1169 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 HCLS1P14317 486 aaPredicted RBP7.1□□□□□ -1.27
SCAF11-210ENST00000547654 ITIH2P19823 946 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 PPP2R3AQ06190 1150 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 FAAP100Q0VG06 881 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 GRM2Q14416 872 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 AOC3Q16853 763 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 KIF4BQ2VIQ3 1234 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 SLC38A3Q99624 504 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 MKNK2Q9HBH9 465 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 SSU72Q9NP77 194 aaKnown RBP7.1□□□□□ -1.27
SCAF11-210ENST00000547654 DISC1Q9NRI5 854 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 KRT82Q9NSB4 513 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 ADAMTS6Q9UKP5 1117 aa7.1□□□□□ -1.27
SCAF11-210ENST00000547654 TMEM265A0A087WTH1 108 aa7.09□□□□□ -1.27
SCAF11-210ENST00000547654 LEFTY1O75610 366 aa7.09□□□□□ -1.27
SCAF11-210ENST00000547654 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
SCAF11-210ENST00000547654 TMEM40Q8WWA1 233 aa7.09□□□□□ -1.27
SCAF11-210ENST00000547654 DUSP23Q9BVJ7 150 aa7.09□□□□□ -1.27
SCAF11-210ENST00000547654 PCOLCE2Q9UKZ9 415 aa7.09□□□□□ -1.27
SCAF11-210ENST00000547654 U3KQE9 123 aa7.09□□□□□ -1.27
SCAF11-210ENST00000547654 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 TOP6BLQ8N6T0 577 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 C3orf58Q8NDZ4 430 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 KCNB2Q92953 911 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 ASB16Q96NS5 453 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 SETDB2Q96T68 719 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 PCDHGC5Q9Y5F6 944 aa7.08□□□□□ -1.28
SCAF11-210ENST00000547654 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
SCAF11-210ENST00000547654 OXCT1P55809 520 aa7.07□□□□□ -1.28
SCAF11-210ENST00000547654 TMEM39AQ9NV64 488 aa7.07□□□□□ -1.28
SCAF11-210ENST00000547654 FCGRTP55899 365 aa7.06□□□□□ -1.28
SCAF11-210ENST00000547654 AEBP1Q8IUX7 1158 aa7.06□□□□□ -1.28
SCAF11-210ENST00000547654 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.06□□□□□ -1.28
SCAF11-210ENST00000547654 ISL2Q96A47 359 aa7.06□□□□□ -1.28
SCAF11-210ENST00000547654 NEFMP07197 916 aa7.05□□□□□ -1.28
SCAF11-210ENST00000547654 IKZF1Q13422 519 aa7.05□□□□□ -1.28
SCAF11-210ENST00000547654 SLC23A3Q6PIS1 610 aa7.05□□□□□ -1.28
SCAF11-210ENST00000547654 SULF2Q8IWU5 870 aa7.05□□□□□ -1.28
SCAF11-210ENST00000547654 PPP4R2Q9NY27 417 aa7.05□□□□□ -1.28
SCAF11-210ENST00000547654 CACNA2D2Q9NY47 1150 aa7.05□□□□□ -1.28
SCAF11-210ENST00000547654 LRRC10BA6NIK2 292 aa7.04□□□□□ -1.28
SCAF11-210ENST00000547654 ZSWIM9Q86XI8 627 aa7.04□□□□□ -1.28
SCAF11-210ENST00000547654 FLAD1Q8NFF5 587 aa7.04□□□□□ -1.28
SCAF11-210ENST00000547654 ACSBG1Q96GR2 724 aa7.04□□□□□ -1.28
SCAF11-210ENST00000547654 GTF2IRD1Q9UHL9 959 aa7.04□□□□□ -1.28
SCAF11-210ENST00000547654 PLAGL2Q9UPG8 496 aa7.04□□□□□ -1.28
SCAF11-210ENST00000547654 MAPK1P28482 360 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 KCNMB1Q16558 191 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 MAP1SQ66K74 1059 aaPredicted RBP7.03□□□□□ -1.28
SCAF11-210ENST00000547654 DNAJC14Q6Y2X3 702 aaPredicted RBP7.03□□□□□ -1.28
SCAF11-210ENST00000547654 PDZD3Q86UT5 571 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 ANKRD24Q8TF21 1146 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 ASB11Q8WXH4 323 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 FAM84AQ96KN4 292 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 OSBPL7Q9BZF2 842 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 PRDM7Q9NQW5 492 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 PICK1Q9NRD5 415 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 NLRP2Q9NX02 1062 aa7.03□□□□□ -1.28
SCAF11-210ENST00000547654 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms