RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 NSUN4Q96CB9 384 aaKnown RBP13.1□□□□□ -0.31
LINC00661-202ENST00000547102 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
LINC00661-202ENST00000547102 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
LINC00661-202ENST00000547102 EXOC6BQ9Y2D4 811 aa13.1□□□□□ -0.31
LINC00661-202ENST00000547102 PLCG2P16885 1265 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 TAF1CQ15572 869 aaPredicted RBP13.09□□□□□ -0.31
LINC00661-202ENST00000547102 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
LINC00661-202ENST00000547102 AACSQ86V21 672 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 ZFPM1Q8IX07 1006 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
LINC00661-202ENST00000547102 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
LINC00661-202ENST00000547102 PTPN18Q99952 460 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 CCDC8Q9H0W5 538 aaPredicted RBP13.09□□□□□ -0.31
LINC00661-202ENST00000547102 R3HDMLQ9H3Y0 253 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 ZFYVE28Q9HCC9 887 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 ZNF112Q9UJU3 913 aa13.09□□□□□ -0.31
LINC00661-202ENST00000547102 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
LINC00661-202ENST00000547102 IRF6O14896 467 aa13.08□□□□□ -0.32
LINC00661-202ENST00000547102 IGSF3O75054 1194 aa13.08□□□□□ -0.32
LINC00661-202ENST00000547102 BAG3O95817 575 aa13.08□□□□□ -0.32
LINC00661-202ENST00000547102 NOL9Q5SY16 702 aaKnown RBP13.08□□□□□ -0.32
LINC00661-202ENST00000547102 TEX11Q8IYF3 940 aa13.08□□□□□ -0.32
LINC00661-202ENST00000547102 ZNF384Q8TF68 577 aa13.08□□□□□ -0.32
LINC00661-202ENST00000547102 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
LINC00661-202ENST00000547102 NPM3O75607 178 aaKnown RBP13.07□□□□□ -0.32
LINC00661-202ENST00000547102 RHBDL3P58872 404 aa13.07□□□□□ -0.32
LINC00661-202ENST00000547102 FBXO46Q6PJ61 603 aaPredicted RBP13.07□□□□□ -0.32
LINC00661-202ENST00000547102 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
LINC00661-202ENST00000547102 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
LINC00661-202ENST00000547102 DDX4Q9NQI0 724 aaKnown RBP13.07□□□□□ -0.32
LINC00661-202ENST00000547102 ZBTB40Q9NUA8 1239 aa13.07□□□□□ -0.32
LINC00661-202ENST00000547102 COL2A1P02458 1487 aaPredicted RBP13.07□□□□□ -0.32
LINC00661-202ENST00000547102 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
LINC00661-202ENST00000547102 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
LINC00661-202ENST00000547102 APBB1O00213 710 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 CYP2E1P05181 493 aaPredicted RBP13.06□□□□□ -0.32
LINC00661-202ENST00000547102 ZAP70P43403 619 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 SP3Q02447 781 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 ARHGEF6Q15052 776 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 SCYL3Q8IZE3 742 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 CLASRPQ8N2M8 674 aaKnown RBP13.06□□□□□ -0.32
LINC00661-202ENST00000547102 FAM43AQ8N2R8 423 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 KIF1BPQ96EK5 621 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 OSBPL5Q9H0X9 879 aaPredicted RBP13.06□□□□□ -0.32
LINC00661-202ENST00000547102 AATFQ9NY61 560 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00661-202ENST00000547102 HPS5Q9UPZ3 1129 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
LINC00661-202ENST00000547102 BTBD19C9JJ37 291 aa13.05□□□□□ -0.32
LINC00661-202ENST00000547102 CTNND1O60716 968 aaKnown RBP13.05□□□□□ -0.32
LINC00661-202ENST00000547102 RAB11FIP3O75154 756 aa13.05□□□□□ -0.32
LINC00661-202ENST00000547102 IDH1O75874 414 aaKnown RBP13.05□□□□□ -0.32
LINC00661-202ENST00000547102 IFIT2P09913 472 aaKnown RBP13.05□□□□□ -0.32
LINC00661-202ENST00000547102 SH3RF3Q8TEJ3 882 aaPredicted RBP13.05□□□□□ -0.32
LINC00661-202ENST00000547102 BCL11AQ9H165 835 aa13.05□□□□□ -0.32
LINC00661-202ENST00000547102 IL1RAPL2Q9NP60 686 aa13.05□□□□□ -0.32
LINC00661-202ENST00000547102 KCNH4Q9UQ05 1017 aa13.05□□□□□ -0.32
LINC00661-202ENST00000547102 PHF20L1A8MW92 1017 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 CXCL11O14625 94 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 CYP7A1P22680 504 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 MAP3K12Q12852 859 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
LINC00661-202ENST00000547102 OTOP1Q7RTM1 612 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 CD99L2Q8TCZ2 262 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00661-202ENST00000547102 PIH1D3Q9NQM4 214 aaKnown RBP13.04□□□□□ -0.32
LINC00661-202ENST00000547102 ZHX2Q9Y6X8 837 aa13.04□□□□□ -0.32
LINC00661-202ENST00000547102 MYO5AQ9Y4I1 1855 aaKnown RBP13.04□□□□□ -0.32
LINC00661-202ENST00000547102 TBC1D12O60347 775 aa13.03□□□□□ -0.32
LINC00661-202ENST00000547102 PTPRAP18433 802 aa13.03□□□□□ -0.32
LINC00661-202ENST00000547102 SOX10P56693 466 aa13.03□□□□□ -0.32
LINC00661-202ENST00000547102 PPP4CP60510 307 aa13.03□□□□□ -0.32
LINC00661-202ENST00000547102 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
LINC00661-202ENST00000547102 MLLT1Q03111 559 aaPredicted RBP13.03□□□□□ -0.32
LINC00661-202ENST00000547102 KIF22Q14807 665 aa13.03□□□□□ -0.32
LINC00661-202ENST00000547102 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
LINC00661-202ENST00000547102 ANKRD23Q86SG2 305 aa13.03□□□□□ -0.32
LINC00661-202ENST00000547102 PARK7Q99497 189 aaKnown RBP13.03□□□□□ -0.32
LINC00661-202ENST00000547102 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
LINC00661-202ENST00000547102 FOCADQ5VW36 1801 aa13.02□□□□□ -0.32
LINC00661-202ENST00000547102 PDHXO00330 501 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 TLR2O60603 784 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 C20orf194Q5TEA3 1177 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 FASTKD5Q7L8L6 764 aaKnown RBP13.02□□□□□ -0.33
LINC00661-202ENST00000547102 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 MAPKAPK5Q8IW41 473 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 MAGEB6Q8N7X4 407 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 TGFBRAP1Q8WUH2 860 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 PI4KBQ9UBF8 816 aa13.02□□□□□ -0.33
LINC00661-202ENST00000547102 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
LINC00661-202ENST00000547102 NDUFB9Q9Y6M9 179 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms