RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 MMS22LQ6ZRQ5 1243 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 CCDC91Q7Z6B0 441 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 TC2NQ8N9U0 490 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 TUBE1Q9UJT0 475 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 CDC23Q9UJX2 597 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 CMA1P23946 247 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 MCTP2Q6DN12 878 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 MPRIPQ6WCQ1 1025 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 SYNE3Q6ZMZ3 975 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 TADA2BQ86TJ2 420 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 ACBD3Q9H3P7 528 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 FAM204AQ9H8W3 233 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 INTS13Q9NVM9 706 aa12.24□□□□□ -0.45
NPAS3-205ENST00000547068 DISP2A7MBM2 1401 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 ATRNO75882 1429 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 CCDC175P0C221 793 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 RHOXF2BP0C7M4 288 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 TUBB4BP68371 445 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 TEFQ10587 303 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 DNAJC21Q5F1R6 531 aaKnown RBP12.23□□□□□ -0.45
NPAS3-205ENST00000547068 SWT1Q5T5J6 900 aaKnown RBP12.23□□□□□ -0.45
NPAS3-205ENST00000547068 RHOXF2Q9BQY4 288 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 GBP3Q9H0R5 595 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 MRPL44Q9H9J2 332 aaKnown RBP12.23□□□□□ -0.45
NPAS3-205ENST00000547068 LZTFL1Q9NQ48 299 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 MAP3K2Q9Y2U5 619 aa12.23□□□□□ -0.45
NPAS3-205ENST00000547068 A0A087WUV0 522 aaPredicted RBP12.22□□□□□ -0.45
NPAS3-205ENST00000547068 CYP27B1O15528 508 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 FDPSP14324 419 aaKnown RBP12.22□□□□□ -0.45
NPAS3-205ENST00000547068 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
NPAS3-205ENST00000547068 SYKP43405 635 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
NPAS3-205ENST00000547068 MCMDC2Q4G0Z9 681 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 HSP90AA4PQ58FG1 418 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 AXDND1Q5T1B0 1012 aaPredicted RBP12.22□□□□□ -0.45
NPAS3-205ENST00000547068 MYSM1Q5VVJ2 828 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 SPECC1LQ69YQ0 1117 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 MED4Q9NPJ6 270 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 PKD1L3Q7Z443 1732 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 CHGBP05060 677 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 VSNL1P62760 191 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 CWF19L2Q2TBE0 894 aaKnown RBP12.22□□□□□ -0.45
NPAS3-205ENST00000547068 DCAF5Q96JK2 942 aa12.22□□□□□ -0.45
NPAS3-205ENST00000547068 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.45
NPAS3-205ENST00000547068 KIF5CO60282 957 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 APPP05067 770 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 HOXB7P09629 217 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 EXOSC10Q01780 885 aaKnown RBP12.21□□□□□ -0.45
NPAS3-205ENST00000547068 PNOCQ13519 176 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
NPAS3-205ENST00000547068 SUCLG2Q96I99 432 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 C8orf76Q96K31 380 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 AGXT2Q9BYV1 514 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 ZNF609O15014 1411 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 MROH7-TTC4A0A0A0MT08 1334 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
NPAS3-205ENST00000547068 EIF5P55010 431 aaKnown RBP12.21□□□□□ -0.45
NPAS3-205ENST00000547068 MTF1Q14872 753 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 SKIDA1Q1XH10 827 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 ANO1Q5XXA6 986 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 BRAPQ7Z569 592 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 CEP89Q96ST8 783 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 NDUFB9Q9Y6M9 179 aa12.21□□□□□ -0.45
NPAS3-205ENST00000547068 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
NPAS3-205ENST00000547068 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.46
NPAS3-205ENST00000547068 TUBB2AQ13885 445 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 AFAP1L1Q8TED9 768 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 TUBB2BQ9BVA1 445 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 FAM107BQ9H098 131 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 LRRIQ3A6PVS8 624 aaPredicted RBP12.2□□□□□ -0.46
NPAS3-205ENST00000547068 RNF40O75150 1001 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 KLHDC4Q8TBB5 520 aa12.2□□□□□ -0.46
NPAS3-205ENST00000547068 CTAGE15A4D2H0 777 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 SOWAHDA6NJG2 315 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 GRM8O00222 908 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
NPAS3-205ENST00000547068 CTAGE8P0CG41 777 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 ATP5JP18859 108 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 GSCP56915 257 aaPredicted RBP12.19□□□□□ -0.46
NPAS3-205ENST00000547068 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
NPAS3-205ENST00000547068 ZNF569Q5MCW4 686 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 CTAGE6Q86UF2 777 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 CTAGE4Q8IX94 777 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 KAZALD1Q96I82 304 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 CXorf56Q9H5V9 222 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 CTAGE9A4FU28 777 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 ERLIN2O94905 339 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 TUBBP07437 444 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 KSR2Q6VAB6 950 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 DBF4Q9UBU7 674 aaPredicted RBP12.19□□□□□ -0.46
NPAS3-205ENST00000547068 GLI3P10071 1580 aa12.19□□□□□ -0.46
NPAS3-205ENST00000547068 CLGNO14967 610 aa12.18□□□□□ -0.46
NPAS3-205ENST00000547068 CCDC172P0C7W6 258 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms