RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PSMA5P28066 241 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 TNFAIP1Q13829 316 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 SPDYE2Q495Y8 402 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 MAPKAPK5Q8IW41 473 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 ADARB2Q9NS39 739 aaKnown RBP18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 ZNF70Q9UC06 446 aaPredicted RBP18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 BAZ2AQ9UIF9 1905 aaKnown RBP18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 USP17L12C9JPN9 530 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 USP17L21D6R901 530 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 PCP11498 1178 aaKnown RBP18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 CTR9Q6PD62 1173 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 TTC6Q86TZ1 520 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 DHX36Q9H2U1 1008 aaKnown RBP18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 RNF41Q9H4P4 317 aaPredicted RBP18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 TSHZ2Q9NRE2 1034 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 ANAPC4Q9UJX5 808 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 TAOK2Q9UL54 1235 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 PCDHAC2Q9Y5I4 1007 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 SNX14Q9Y5W7 946 aa18.81■□□□□ 0.6
TRAFD1-203ENST00000547063 GOLGB1Q14789 3259 aaKnown RBP18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 MYH1P12882 1939 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 COL2A1P02458 1487 aaPredicted RBP18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 POLR3DP05423 398 aaPredicted RBP18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 TNNI2P48788 182 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 NT5C2P49902 561 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 PPARAQ07869 468 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 PICALMQ13492 652 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 TBC1D10BQ4KMP7 808 aaPredicted RBP18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 RBM26Q5T8P6 1007 aaKnown RBP18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 SAMD7Q7Z3H4 446 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 OSBPL5Q9H0X9 879 aaPredicted RBP18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 ZNF287Q9HBT7 754 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
TRAFD1-203ENST00000547063 SCN4AP35499 1836 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 LAMB1P07942 1786 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 SHTN1A0MZ66 631 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 MINDY4BA8MYZ0 360 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 HLA-DOAP06340 250 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 HMGB1P09429 215 aaKnown RBP18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 EPS15P42566 896 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 TRDNQ13061 729 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 RABEP1Q15276 862 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 C12orf60Q5U649 245 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 FAM83AQ86UY5 434 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 TM6SF1Q9BZW5 370 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 CNNM2Q9H8M5 875 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 PALD1Q9ULE6 856 aa18.79■□□□□ 0.6
TRAFD1-203ENST00000547063 DDX60LQ5H9U9 1706 aaKnown RBP18.78■□□□□ 0.6
TRAFD1-203ENST00000547063 HAND2P61296 217 aa18.78■□□□□ 0.6
TRAFD1-203ENST00000547063 NBPF9Q3BBW0 867 aa18.78■□□□□ 0.6
TRAFD1-203ENST00000547063 RASEFQ8IZ41 740 aa18.78■□□□□ 0.6
TRAFD1-203ENST00000547063 VEZTQ9HBM0 779 aa18.78■□□□□ 0.6
TRAFD1-203ENST00000547063 DDX4Q9NQI0 724 aaKnown RBP18.78■□□□□ 0.6
TRAFD1-203ENST00000547063 WDR90Q96KV7 1748 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 CLRN2A0PK11 232 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 PDE4BQ07343 736 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 NFIAQ12857 509 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 AKNAD1Q5T1N1 836 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 MFSD6Q6ZSS7 791 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 RALYLQ86SE5 291 aaKnown RBP18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 APOBEC3FQ8IUX4 373 aaKnown RBP18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 STAG1Q8WVM7 1258 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 FAM151AQ8WW52 585 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 KRT23Q9C075 422 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 FAM198AQ9UFP1 575 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 ROBO3Q96MS0 1386 aa18.77■□□□□ 0.6
TRAFD1-203ENST00000547063 E7EWF7 191 aa18.76■□□□□ 0.59
TRAFD1-203ENST00000547063 CACNB3P54284 484 aa18.76■□□□□ 0.59
TRAFD1-203ENST00000547063 NCOA7Q8NI08 942 aa18.76■□□□□ 0.59
TRAFD1-203ENST00000547063 JAKMIP1Q96N16 626 aaKnown RBP18.76■□□□□ 0.59
TRAFD1-203ENST00000547063 NEK1Q96PY6 1258 aa18.76■□□□□ 0.59
TRAFD1-203ENST00000547063 SAP30BPQ9UHR5 308 aaKnown RBP18.76■□□□□ 0.59
TRAFD1-203ENST00000547063 ATRNL1Q5VV63 1379 aa18.76■□□□□ 0.59
TRAFD1-203ENST00000547063 PITPNM2Q9BZ72 1349 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 TCP10L2B9ZVM9 353 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 EGFRP00533 1210 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 EPHX2P34913 555 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 TCP10Q12799 353 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 BLOC1S2Q6QNY1 142 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 PNMA8AQ86V59 439 aaPredicted RBP18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 ZSCAN29Q8IWY8 852 aaPredicted RBP18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 TRPM4Q8TD43 1214 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 KIF2CQ99661 725 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 EHD4Q9H223 541 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 PI4KBQ9UBF8 816 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 CYP46A1Q9Y6A2 500 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 SRCAPQ6ZRS2 3230 aa18.75■□□□□ 0.59
TRAFD1-203ENST00000547063 CASTP20810 708 aaKnown RBP18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 CTDSPL2Q05D32 466 aa18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 FOXP4Q8IVH2 680 aaPredicted RBP18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 PIAS4Q8N2W9 510 aaPredicted RBP18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 ZC3H15Q8WU90 426 aaKnown RBP18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 TRIM34Q9BYJ4 488 aa18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 ZSWIM6Q9HCJ5 1215 aa18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 SERPINB13Q9UIV8 391 aa18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 PPP2R3BQ9Y5P8 575 aa18.74■□□□□ 0.59
TRAFD1-203ENST00000547063 CYP2D7A0A087X1C5 515 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 ST18O60284 1047 aa18.73■□□□□ 0.59
TRAFD1-203ENST00000547063 FGRP09769 529 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms