RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 TRPM4Q8TD43 1214 aa19.48■□□□□ 0.71
PPP1CA-211ENST00000546202 SDR42E1Q8WUS8 393 aa19.48■□□□□ 0.71
PPP1CA-211ENST00000546202 IDI2Q9BXS1 227 aa19.48■□□□□ 0.71
PPP1CA-211ENST00000546202 USP26Q9BXU7 913 aa19.48■□□□□ 0.71
PPP1CA-211ENST00000546202 EPB41L4AQ9HCS5 686 aaPredicted RBP19.48■□□□□ 0.71
PPP1CA-211ENST00000546202 ZNF70Q9UC06 446 aaPredicted RBP19.48■□□□□ 0.71
PPP1CA-211ENST00000546202 IQCA1LA6NCM1 817 aa19.47■□□□□ 0.71
PPP1CA-211ENST00000546202 POTECB2RU33 542 aa19.47■□□□□ 0.71
PPP1CA-211ENST00000546202 MYO1BO43795 1136 aa19.47■□□□□ 0.71
PPP1CA-211ENST00000546202 FKBP1CQ5VVH2 108 aa19.47■□□□□ 0.71
PPP1CA-211ENST00000546202 TGFBRAP1Q8WUH2 860 aa19.47■□□□□ 0.71
PPP1CA-211ENST00000546202 DCP1AQ9NPI6 582 aaPredicted RBP19.47■□□□□ 0.71
PPP1CA-211ENST00000546202 APPP05067 770 aa19.46■□□□□ 0.71
PPP1CA-211ENST00000546202 USP5P45974 858 aa19.46■□□□□ 0.71
PPP1CA-211ENST00000546202 HIRAP54198 1017 aaPredicted RBP19.46■□□□□ 0.71
PPP1CA-211ENST00000546202 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
PPP1CA-211ENST00000546202 RBM8AQ9Y5S9 174 aaKnown RBP19.46■□□□□ 0.71
PPP1CA-211ENST00000546202 U3KPZ7 1027 aaPredicted RBP19.46■□□□□ 0.71
PPP1CA-211ENST00000546202 FLT1P17948 1338 aa19.46■□□□□ 0.71
PPP1CA-211ENST00000546202 POLR2AP24928 1970 aaKnown RBP19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 CLRN2A0PK11 232 aa19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 FGAP02671 866 aa19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 EPHX2P34913 555 aa19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 NFIAQ12857 509 aa19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 USP50Q70EL3 339 aaPredicted RBP19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 TAF1DQ9H5J8 278 aaPredicted RBP19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 DDX4Q9NQI0 724 aaKnown RBP19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 TMOD2Q9NZR1 351 aa19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 FAM198AQ9UFP1 575 aa19.45■□□□□ 0.7
PPP1CA-211ENST00000546202 COL2A1P02458 1487 aaPredicted RBP19.44■□□□□ 0.7
PPP1CA-211ENST00000546202 CACNB3P54284 484 aa19.44■□□□□ 0.7
PPP1CA-211ENST00000546202 NECTIN1Q15223 517 aa19.44■□□□□ 0.7
PPP1CA-211ENST00000546202 MAPKAPK5Q8IW41 473 aa19.44■□□□□ 0.7
PPP1CA-211ENST00000546202 DDRGK1Q96HY6 314 aa19.44■□□□□ 0.7
PPP1CA-211ENST00000546202 NAPBQ9H115 298 aa19.44■□□□□ 0.7
PPP1CA-211ENST00000546202 CTNNA3Q9UI47 895 aa19.44■□□□□ 0.7
PPP1CA-211ENST00000546202 ENTPD3O75355 529 aa19.43■□□□□ 0.7
PPP1CA-211ENST00000546202 TDO2P48775 406 aa19.43■□□□□ 0.7
PPP1CA-211ENST00000546202 SBK1Q52WX2 424 aa19.43■□□□□ 0.7
PPP1CA-211ENST00000546202 OSBPL5Q9H0X9 879 aaPredicted RBP19.43■□□□□ 0.7
PPP1CA-211ENST00000546202 SIPA1L1O43166 1804 aa19.43■□□□□ 0.7
PPP1CA-211ENST00000546202 ASTN2O75129 1339 aaPredicted RBP19.43■□□□□ 0.7
PPP1CA-211ENST00000546202 CNTNAP1P78357 1384 aa19.43■□□□□ 0.7
PPP1CA-211ENST00000546202 HSPA4P34932 840 aa19.42■□□□□ 0.7
PPP1CA-211ENST00000546202 PICALMQ13492 652 aa19.42■□□□□ 0.7
PPP1CA-211ENST00000546202 CTR9Q6PD62 1173 aa19.42■□□□□ 0.7
PPP1CA-211ENST00000546202 FAM83AQ86UY5 434 aa19.42■□□□□ 0.7
PPP1CA-211ENST00000546202 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
PPP1CA-211ENST00000546202 PITPNM2Q9BZ72 1349 aa19.42■□□□□ 0.7
PPP1CA-211ENST00000546202 TCP10L2B9ZVM9 353 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 USP17L12C9JPN9 530 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 USP17L21D6R901 530 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 PNMA8AQ86V59 439 aaPredicted RBP19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 KCNB2Q92953 911 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 VEZTQ9HBM0 779 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 MCM9Q9NXL9 1143 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 PGAP2Q9UHJ9 254 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 ATRNL1Q5VV63 1379 aa19.41■□□□□ 0.7
PPP1CA-211ENST00000546202 ANGEL2Q5VTE6 544 aaKnown RBP19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 CREB3L3Q68CJ9 461 aa19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 APOBEC3FQ8IUX4 373 aaKnown RBP19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 ZFPM1Q8IX07 1006 aa19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 FAM151AQ8WW52 585 aa19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 GGA3Q9NZ52 723 aa19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 ANAPC4Q9UJX5 808 aa19.4■□□□□ 0.7
PPP1CA-211ENST00000546202 SLC27A2O14975 620 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 CYP21A2P08686 494 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 MCCP23508 829 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 TNNI2P48788 182 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 RBM25P49756 843 aaKnown RBP19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 TCP10Q12799 353 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 TNFAIP1Q13829 316 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 IMMTQ16891 758 aaKnown RBP19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 C12orf60Q5U649 245 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 RNF20Q5VTR2 975 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 DHX36Q9H2U1 1008 aaKnown RBP19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 SAP30BPQ9UHR5 308 aaKnown RBP19.39■□□□□ 0.69
PPP1CA-211ENST00000546202 ZNF213O14771 459 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 CYP2D6P10635 497 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 MYH8P13535 1937 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 PPARAQ07869 468 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 TSGA10IPQ3SY00 556 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 SH3BP5LQ7L8J4 393 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 IL17RAQ96F46 866 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 ROBO3Q96MS0 1386 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 TBC1D32Q96NH3 1257 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 NBPF3Q9H094 633 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 PALD1Q9ULE6 856 aa19.38■□□□□ 0.69
PPP1CA-211ENST00000546202 CYP2D7A0A087X1C5 515 aa19.37■□□□□ 0.69
PPP1CA-211ENST00000546202 MINDY4BA8MYZ0 360 aa19.37■□□□□ 0.69
PPP1CA-211ENST00000546202 POLR3DP05423 398 aaPredicted RBP19.37■□□□□ 0.69
PPP1CA-211ENST00000546202 HAND2P61296 217 aa19.37■□□□□ 0.69
PPP1CA-211ENST00000546202 RASA3Q14644 834 aa19.37■□□□□ 0.69
PPP1CA-211ENST00000546202 TTC6Q86TZ1 520 aa19.37■□□□□ 0.69
PPP1CA-211ENST00000546202 AMOTL1Q8IY63 956 aa19.37■□□□□ 0.69
PPP1CA-211ENST00000546202 DDTLA6NHG4 134 aaPredicted RBP19.36■□□□□ 0.69
PPP1CA-211ENST00000546202 SMIM22K7EJ46 135 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms