RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 PICALMQ13492 652 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 SULF1Q8IWU6 871 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-216ENST00000546039 TGFBRAP1Q8WUH2 860 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 SDR42E1Q8WUS8 393 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 DDX4Q9NQI0 724 aaKnown RBP12.89□□□□□ -0.35
PAAF1-216ENST00000546039 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 CNTNAP1P78357 1384 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 PAPPA2Q9BXP8 1791 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 KIF3CO14782 793 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 MAPKAPK5Q8IW41 473 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 FAM151AQ8WW52 585 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-216ENST00000546039 IL25Q9H293 177 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 DCP1AQ9NPI6 582 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-216ENST00000546039 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 ATRNL1Q5VV63 1379 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 DOCK1Q14185 1865 aa12.88□□□□□ -0.35
PAAF1-216ENST00000546039 GSG1L2A8MUP6 293 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 PATL2C9JE40 543 aaKnown RBP12.87□□□□□ -0.35
PAAF1-216ENST00000546039 PRKAB2O43741 272 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 REC8O95072 547 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 APPP05067 770 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
PAAF1-216ENST00000546039 TCP10Q12799 353 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 ALX1Q15699 326 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 KRT26Q7Z3Y9 468 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 NAPBQ9H115 298 aa12.87□□□□□ -0.35
PAAF1-216ENST00000546039 ARPP21Q9UBL0 812 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-216ENST00000546039 MKRN1Q9UHC7 482 aaKnown RBP12.87□□□□□ -0.35
PAAF1-216ENST00000546039 FOXP2O15409 715 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 TDO2P48775 406 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 RASA3Q14644 834 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 CDC37L1Q7L3B6 337 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 IFNL3Q8IZI9 196 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 DEFB129Q9H1M3 183 aa12.86□□□□□ -0.35
PAAF1-216ENST00000546039 DHX36Q9H2U1 1008 aaKnown RBP12.86□□□□□ -0.35
PAAF1-216ENST00000546039 EPB41L4AQ9HCS5 686 aaPredicted RBP12.86□□□□□ -0.35
PAAF1-216ENST00000546039 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 ADM5C9JUS6 153 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 HLA-DOAP06340 250 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 SBK1Q52WX2 424 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 MAP1SQ66K74 1059 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-216ENST00000546039 ZSCAN29Q8IWY8 852 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-216ENST00000546039 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
PAAF1-216ENST00000546039 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 TMEM39BQ9GZU3 492 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 ANO2Q9NQ90 1003 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 MCM9Q9NXL9 1143 aa12.85□□□□□ -0.35
PAAF1-216ENST00000546039 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
PAAF1-216ENST00000546039 GREB1LQ9C091 1923 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-216ENST00000546039 MYH4Q9Y623 1939 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
PAAF1-216ENST00000546039 TOMM70O94826 608 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-216ENST00000546039 PTH1RQ03431 593 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 TTC6Q86TZ1 520 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 USP48Q86UV5 1035 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 ZFPM1Q8IX07 1006 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 CSRNP1Q96S65 589 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-216ENST00000546039 LSG1Q9H089 658 aaKnown RBP12.84□□□□□ -0.35
PAAF1-216ENST00000546039 CTNNA3Q9UI47 895 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-216ENST00000546039 SSC5DA1L4H1 1573 aa12.84□□□□□ -0.35
PAAF1-216ENST00000546039 DDTLA6NHG4 134 aaPredicted RBP12.83□□□□□ -0.36
PAAF1-216ENST00000546039 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 USP17L21D6R901 530 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 FGAP02671 866 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 NF2P35240 595 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 SUPT20HL1Q3ZLR7 823 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 C12orf60Q5U649 245 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 CTR9Q6PD62 1173 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 SH3BP5LQ7L8J4 393 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 MAP4K1Q92918 833 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 EHD4Q9H223 541 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
PAAF1-216ENST00000546039 PHIPQ8WWQ0 1821 aa12.83□□□□□ -0.36
PAAF1-216ENST00000546039 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
PAAF1-216ENST00000546039 HERC5Q9UII4 1024 aaKnown RBP12.82□□□□□ -0.36
PAAF1-216ENST00000546039 RBM8AQ9Y5S9 174 aaKnown RBP12.82□□□□□ -0.36
PAAF1-216ENST00000546039 PTPRFP10586 1907 aa12.82□□□□□ -0.36
PAAF1-216ENST00000546039 MINDY4BA8MYZ0 360 aa12.81□□□□□ -0.36
PAAF1-216ENST00000546039 TBC1D12O60347 775 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms