RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 BAG1Q99933 345 aaPredicted RBP10.05□□□□□ -0.8
TDP1-204ENST00000545686 CARD6Q9BX69 1037 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 ST7Q9NRC1 585 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 INTS13Q9NVM9 706 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 FANCLQ9NW38 375 aa10.05□□□□□ -0.8
TDP1-204ENST00000545686 LRP5O75197 1615 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 TOGARAM1Q9Y4F4 1720 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 ZBTB43O43298 467 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 ZNF18P17022 549 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 CASQ1P31415 396 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 IARSP41252 1262 aaKnown RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 SCARF1Q14162 830 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 UBE3CQ15386 1083 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 NTRK3Q16288 839 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 CT47A1Q5JQC4 288 aaPredicted RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 SPECC1LQ69YQ0 1117 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 TBC1D10CQ8IV04 446 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
TDP1-204ENST00000545686 PCDHA5Q9Y5H7 936 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 MRFAP1Q9Y605 127 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 TMEM232C9JQI7 657 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 LIFRP42702 1097 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 MDM2Q00987 491 aaPredicted RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 LONRF3Q496Y0 759 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 ISM2Q6H9L7 571 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 CYB5R4Q7L1T6 521 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 RSRC2Q7L4I2 434 aaKnown RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 RAB11FIP4Q86YS3 637 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 ENOX1Q8TC92 643 aaKnown RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 SYTL4Q96C24 671 aaPredicted RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
TDP1-204ENST00000545686 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.04□□□□□ -0.8
TDP1-204ENST00000545686 UBN2Q6ZU65 1347 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 CSF1RP07333 972 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 POSTNQ15063 836 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 ALX1Q15699 326 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 KANK3Q6NY19 840 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 CC2D1AQ6P1N0 951 aaPredicted RBP10.03□□□□□ -0.8
TDP1-204ENST00000545686 TC2NQ8N9U0 490 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
TDP1-204ENST00000545686 AIFM3Q96NN9 605 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.03□□□□□ -0.8
TDP1-204ENST00000545686 PLCH1Q4KWH8 1693 aa10.03□□□□□ -0.8
TDP1-204ENST00000545686 GOLGA8AA7E2F4 631 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 FMNL1O95466 1100 aaPredicted RBP10.02□□□□□ -0.8
TDP1-204ENST00000545686 CDC27P30260 824 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 GNG11P61952 73 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 PPP2R3AQ06190 1150 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 TCIRG1Q13488 830 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 TAF7LQ5H9L4 462 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.8
TDP1-204ENST00000545686 FOXP4Q8IVH2 680 aaPredicted RBP10.02□□□□□ -0.8
TDP1-204ENST00000545686 NOSTRINQ8IVI9 506 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 TXLNBQ8N3L3 684 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 KIFC2Q96AC6 838 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 LY9Q9HBG7 655 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 MAN1B1Q9UKM7 699 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 CDHR2Q9BYE9 1310 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 NUP98P52948 1817 aa10.02□□□□□ -0.8
TDP1-204ENST00000545686 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.81
TDP1-204ENST00000545686 TBC1D8O95759 1140 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 A1BGP04217 495 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 BMP6P22004 513 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 MCAMP43121 646 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 SARSP49591 514 aaKnown RBP10.02□□□□□ -0.81
TDP1-204ENST00000545686 IFIT5Q13325 482 aaKnown RBP10.02□□□□□ -0.81
TDP1-204ENST00000545686 MORC3Q14149 939 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 SAFBQ15424 915 aaKnown RBP eCLIP10.02□□□□□ -0.81
TDP1-204ENST00000545686 RILPL1Q5EBL4 403 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 MICU3Q86XE3 530 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 IGDCC4Q8TDY8 1250 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 GOLGA1Q92805 767 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 CLIC6Q96NY7 704 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 PANX2Q96RD6 677 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 DLEC1Q9Y238 1755 aa10.02□□□□□ -0.81
TDP1-204ENST00000545686 IFNAR1P17181 557 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 PTPREP23469 700 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
TDP1-204ENST00000545686 RCAN1P53805 252 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 TUBB4BP68371 445 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 PDE4BQ07343 736 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 SSRP1Q08945 709 aaKnown RBP10.01□□□□□ -0.81
TDP1-204ENST00000545686 TUBB2AQ13885 445 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 NKX1-1Q15270 411 aaPredicted RBP10.01□□□□□ -0.81
TDP1-204ENST00000545686 HSP90AB3PQ58FF7 597 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 PHKBQ93100 1093 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 SMARCE1Q969G3 411 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 TUBB2BQ9BVA1 445 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 NAA15Q9BXJ9 866 aaKnown RBP10.01□□□□□ -0.81
TDP1-204ENST00000545686 FOXP1Q9H334 677 aaPredicted RBP10.01□□□□□ -0.81
TDP1-204ENST00000545686 ARFGAP3Q9NP61 516 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 RAI14Q9P0K7 980 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 TBC1D2BQ9UPU7 963 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 NFE2L3Q9Y4A8 694 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 WDR17Q8IZU2 1322 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 CCDC151A5D8V7 595 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 ERICH4A6NGS2 130 aa10.01□□□□□ -0.81
TDP1-204ENST00000545686 MMP1P03956 469 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms