RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 TAF7LQ5H9L4 462 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 MFSD14BQ5SR56 506 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 OTUD7BQ6GQQ9 843 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 TDRD7Q8NHU6 1098 aaKnown RBP8.11□□□□□ -1.11
CDCA3-209ENST00000544610 CD99L2Q8TCZ2 262 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 OPTNQ96CV9 577 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 TEPSINQ96N21 525 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 MEIS3Q99687 375 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 PTPN18Q99952 460 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 CNNM1Q9NRU3 951 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 C9orf78Q9NZ63 289 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-209ENST00000544610 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-209ENST00000544610 TTF2Q9UNY4 1162 aaKnown RBP8.11□□□□□ -1.11
CDCA3-209ENST00000544610 TNNQ9UQP3 1299 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 PTPN22Q9Y2R2 807 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 PCDHB15Q9Y5E8 787 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 HIBADHP31937 336 aaKnown RBP8.1□□□□□ -1.11
CDCA3-209ENST00000544610 GYG1P46976 350 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 CAP1Q01518 475 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 SP3Q02447 781 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 CEP85Q6P2H3 762 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
CDCA3-209ENST00000544610 SSH3Q8TE77 659 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 KAZALD1Q96I82 304 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 MS4A4AQ96JQ5 239 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 FAM84BQ96KN1 310 aaPredicted RBP8.1□□□□□ -1.11
CDCA3-209ENST00000544610 DCTPP1Q9H773 170 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 TDRD3Q9H7E2 651 aaKnown RBP8.1□□□□□ -1.11
CDCA3-209ENST00000544610 ELP3Q9H9T3 547 aa8.1□□□□□ -1.11
CDCA3-209ENST00000544610 MROH5Q6ZUA9 1318 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 MAP3K13O43283 966 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 CRKP46108 304 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 TNNI2P48788 182 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 VGLL4Q14135 290 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.09□□□□□ -1.112e-7■■□□□ 13.8
CDCA3-209ENST00000544610 BRI3BPQ8WY22 251 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 SUCLG2Q96I99 432 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 PUS3Q9BZE2 481 aaKnown RBP8.09□□□□□ -1.11
CDCA3-209ENST00000544610 TMEM39BQ9GZU3 492 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 EFCC1Q9HA90 598 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
CDCA3-209ENST00000544610 NOP58Q9Y2X3 529 aaKnown RBP8.09□□□□□ -1.11
CDCA3-209ENST00000544610 RIPOR2Q9Y4F9 1068 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 PDE4DIPQ5VU43 2346 aa8.09□□□□□ -1.11
CDCA3-209ENST00000544610 SPDYE5A6NIY4 337 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 TCP10L2B9ZVM9 353 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 RAB11FIP3O75154 756 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 NBPF7P0C2Y1 421 aaPredicted RBP8.08□□□□□ -1.12
CDCA3-209ENST00000544610 GTF2A2P52657 109 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
CDCA3-209ENST00000544610 GRIK5Q16478 980 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 B4GALNT3Q6L9W6 998 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 FBXO33Q7Z6M2 555 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 ERC1Q8IUD2 1116 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 SIRT2Q8IXJ6 389 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 VGLL2Q8N8G2 317 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 ZNF333Q96JL9 665 aa8.08□□□□□ -1.12
CDCA3-209ENST00000544610 CCL15-CCL14A0A0B4J2E2 113 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 MAP3K9P80192 1104 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 TAF1CQ15572 869 aaPredicted RBP8.07□□□□□ -1.12
CDCA3-209ENST00000544610 CCL15Q16663 113 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 VPS37DQ86XT2 251 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 FAM43AQ8N2R8 423 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 EFCAB3Q8N7B9 438 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 TBC1D22AQ8WUA7 517 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 TEKT1Q969V4 418 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 BICC1Q9H694 974 aaKnown RBP8.07□□□□□ -1.12
CDCA3-209ENST00000544610 ZFYVE28Q9HCC9 887 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 COPRSQ9NQ92 184 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 CSADQ9Y600 493 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 LRRFIP2Q9Y608 721 aaKnown RBP8.07□□□□□ -1.12
CDCA3-209ENST00000544610 SNCAIPQ9Y6H5 919 aa8.07□□□□□ -1.12
CDCA3-209ENST00000544610 RPAP1Q9BWH6 1393 aaPredicted RBP8.07□□□□□ -1.12
CDCA3-209ENST00000544610 PDE8BO95263 885 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 IGHDP01880 384 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 EN2P19622 333 aaPredicted RBP8.06□□□□□ -1.12
CDCA3-209ENST00000544610 CACNB3P54284 484 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 NUCB1Q02818 461 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 CHAF1AQ13111 956 aaPredicted RBP8.06□□□□□ -1.12
CDCA3-209ENST00000544610 ARHGEF6Q15052 776 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 LRRC24Q50LG9 513 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 HABP4Q5JVS0 413 aaKnown RBP8.06□□□□□ -1.12
CDCA3-209ENST00000544610 METTL24Q5JXM2 366 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 FKBP1CQ5VVH2 108 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 FAM83AQ86UY5 434 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 ERO1BQ86YB8 467 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 FBXO22Q8NEZ5 403 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 ZDHHC15Q96MV8 337 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
CDCA3-209ENST00000544610 MRIQ9BWK5 157 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 ZCCHC17Q9NP64 241 aaKnown RBP8.06□□□□□ -1.12
CDCA3-209ENST00000544610 IQSEC3Q9UPP2 1182 aaPredicted RBP8.06□□□□□ -1.12
CDCA3-209ENST00000544610 PTCH2Q9Y6C5 1203 aa8.06□□□□□ -1.12
CDCA3-209ENST00000544610 MAST3O60307 1309 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 SRGAP3O43295 1099 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 TLR2O60603 784 aa8.05□□□□□ -1.12
CDCA3-209ENST00000544610 FRAT2O75474 233 aaPredicted RBP8.05□□□□□ -1.12
CDCA3-209ENST00000544610 CIAO1O76071 339 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms