RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 TEX11Q8IYF3 940 aa16.09■□□□□ 0.17
CIT-214ENST00000544588 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
CIT-214ENST00000544588 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
CIT-214ENST00000544588 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
CIT-214ENST00000544588 MS4A4AQ96JQ5 239 aa16.09■□□□□ 0.17
CIT-214ENST00000544588 DDX4Q9NQI0 724 aaKnown RBP16.09■□□□□ 0.17
CIT-214ENST00000544588 DDTLA6NHG4 134 aaPredicted RBP16.08■□□□□ 0.16
CIT-214ENST00000544588 IRF6O14896 467 aa16.08■□□□□ 0.16
CIT-214ENST00000544588 IDH1O75874 414 aaKnown RBP16.08■□□□□ 0.16
CIT-214ENST00000544588 CETPP11597 493 aa16.08■□□□□ 0.16
CIT-214ENST00000544588 RHBDL3P58872 404 aa16.08■□□□□ 0.16
CIT-214ENST00000544588 SNAPC2Q13487 334 aa16.08■□□□□ 0.16
CIT-214ENST00000544588 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.16
CIT-214ENST00000544588 KIF1BPQ96EK5 621 aa16.08■□□□□ 0.16
CIT-214ENST00000544588 ZNF512BQ96KM6 892 aaPredicted RBP16.08■□□□□ 0.16
CIT-214ENST00000544588 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
CIT-214ENST00000544588 RPAP1Q9BWH6 1393 aaPredicted RBP16.08■□□□□ 0.16
CIT-214ENST00000544588 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
CIT-214ENST00000544588 IFIT2P09913 472 aaKnown RBP16.07■□□□□ 0.16
CIT-214ENST00000544588 CRHR2Q13324 411 aa16.07■□□□□ 0.16
CIT-214ENST00000544588 PPIL2Q13356 520 aa16.07■□□□□ 0.16
CIT-214ENST00000544588 TAF1CQ15572 869 aaPredicted RBP16.07■□□□□ 0.16
CIT-214ENST00000544588 SH3BP5LQ7L8J4 393 aa16.07■□□□□ 0.16
CIT-214ENST00000544588 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
CIT-214ENST00000544588 PIH1D3Q9NQM4 214 aaKnown RBP16.07■□□□□ 0.16
CIT-214ENST00000544588 PICK1Q9NRD5 415 aa16.07■□□□□ 0.16
CIT-214ENST00000544588 ZNF112Q9UJU3 913 aa16.07■□□□□ 0.16
CIT-214ENST00000544588 NDUFB9Q9Y6M9 179 aa16.07■□□□□ 0.16
CIT-214ENST00000544588 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
CIT-214ENST00000544588 SLURP2P0DP57 97 aa16.06■□□□□ 0.16
CIT-214ENST00000544588 CYP7A1P22680 504 aa16.06■□□□□ 0.16
CIT-214ENST00000544588 PPATQ06203 517 aa16.06■□□□□ 0.16
CIT-214ENST00000544588 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
CIT-214ENST00000544588 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
CIT-214ENST00000544588 ZFYVE28Q9HCC9 887 aa16.06■□□□□ 0.16
CIT-214ENST00000544588 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
CIT-214ENST00000544588 PLCG2P16885 1265 aa16.05■□□□□ 0.16
CIT-214ENST00000544588 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
CIT-214ENST00000544588 FAM43AQ8N2R8 423 aa16.05■□□□□ 0.16
CIT-214ENST00000544588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.05■□□□□ 0.16
CIT-214ENST00000544588 MAP3K12Q12852 859 aa16.04■□□□□ 0.16
CIT-214ENST00000544588 PKN2Q16513 984 aaKnown RBP16.04■□□□□ 0.16
CIT-214ENST00000544588 MAPKAPK5Q8IW41 473 aa16.04■□□□□ 0.16
CIT-214ENST00000544588 MAGEB6Q8N7X4 407 aa16.04■□□□□ 0.16
CIT-214ENST00000544588 TGFBRAP1Q8WUH2 860 aa16.04■□□□□ 0.16
CIT-214ENST00000544588 OSBPL5Q9H0X9 879 aaPredicted RBP16.04■□□□□ 0.16
CIT-214ENST00000544588 TRIM17Q9Y577 477 aa16.04■□□□□ 0.16
CIT-214ENST00000544588 ZHX2Q9Y6X8 837 aa16.04■□□□□ 0.16
CIT-214ENST00000544588 FAM196BA6NMK8 535 aa16.03■□□□□ 0.16
CIT-214ENST00000544588 BTBD19C9JJ37 291 aa16.03■□□□□ 0.16
CIT-214ENST00000544588 DYNLL1P63167 89 aaKnown RBP16.03■□□□□ 0.16
CIT-214ENST00000544588 SP3Q02447 781 aa16.03■□□□□ 0.16
CIT-214ENST00000544588 NOL9Q5SY16 702 aaKnown RBP16.03■□□□□ 0.16
CIT-214ENST00000544588 SCYL3Q8IZE3 742 aa16.03■□□□□ 0.16
CIT-214ENST00000544588 MIGA1Q8NAN2 632 aa16.03■□□□□ 0.16
CIT-214ENST00000544588 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
CIT-214ENST00000544588 DNAJC2Q99543 621 aaKnown RBP16.03■□□□□ 0.16
CIT-214ENST00000544588 ANTXR1Q9H6X2 564 aa16.03■□□□□ 0.16
CIT-214ENST00000544588 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
CIT-214ENST00000544588 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.16
CIT-214ENST00000544588 PPP4CP60510 307 aa16.02■□□□□ 0.16
CIT-214ENST00000544588 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.16
CIT-214ENST00000544588 CD99L2Q8TCZ2 262 aa16.02■□□□□ 0.16
CIT-214ENST00000544588 TRIM34Q9BYJ4 488 aa16.02■□□□□ 0.16
CIT-214ENST00000544588 HPS5Q9UPZ3 1129 aa16.02■□□□□ 0.16
CIT-214ENST00000544588 CTNND1O60716 968 aaKnown RBP16.01■□□□□ 0.15
CIT-214ENST00000544588 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
CIT-214ENST00000544588 USP5P45974 858 aa16.01■□□□□ 0.15
CIT-214ENST00000544588 TTF1Q15361 905 aaPredicted RBP16.01■□□□□ 0.15
CIT-214ENST00000544588 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
CIT-214ENST00000544588 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
CIT-214ENST00000544588 SAP30BPQ9UHR5 308 aaKnown RBP16.01■□□□□ 0.15
CIT-214ENST00000544588 ARAP2Q8WZ64 1704 aa16■□□□□ 0.15
CIT-214ENST00000544588 GOLIM4O00461 696 aa16■□□□□ 0.15
CIT-214ENST00000544588 TBC1D12O60347 775 aa16■□□□□ 0.15
CIT-214ENST00000544588 IGSF3O75054 1194 aa16■□□□□ 0.15
CIT-214ENST00000544588 PTPRAP18433 802 aa16■□□□□ 0.15
CIT-214ENST00000544588 MAP3K10Q02779 954 aa16■□□□□ 0.15
CIT-214ENST00000544588 FBXO46Q6PJ61 603 aaPredicted RBP16■□□□□ 0.15
CIT-214ENST00000544588 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
CIT-214ENST00000544588 CCDC84Q86UT8 332 aaPredicted RBP16■□□□□ 0.15
CIT-214ENST00000544588 CRACR2BQ8N4Y2 399 aaPredicted RBP16■□□□□ 0.15
CIT-214ENST00000544588 LRRCC1Q9C099 1032 aa16■□□□□ 0.15
CIT-214ENST00000544588 BOLA2Q9H3K6 86 aa16■□□□□ 0.15
CIT-214ENST00000544588 EFCC1Q9HA90 598 aa16■□□□□ 0.15
CIT-214ENST00000544588 PI4KBQ9UBF8 816 aa16■□□□□ 0.15
CIT-214ENST00000544588 PALD1Q9ULE6 856 aa16■□□□□ 0.15
CIT-214ENST00000544588 KCNH4Q9UQ05 1017 aa16■□□□□ 0.15
CIT-214ENST00000544588 CASP8AP2Q9UKL3 1982 aa16■□□□□ 0.15
CIT-214ENST00000544588 RFX7Q2KHR2 1363 aa16■□□□□ 0.15
CIT-214ENST00000544588 ATRNL1Q5VV63 1379 aa16■□□□□ 0.15
CIT-214ENST00000544588 TRIM75PA6NK02 468 aa15.99■□□□□ 0.15
CIT-214ENST00000544588 PDHXO00330 501 aa15.99■□□□□ 0.15
CIT-214ENST00000544588 CXCL11O14625 94 aa15.99■□□□□ 0.15
CIT-214ENST00000544588 SMARCA5O60264 1052 aaPredicted RBP15.99■□□□□ 0.15
CIT-214ENST00000544588 SOX10P56693 466 aa15.99■□□□□ 0.15
CIT-214ENST00000544588 ARHGEF6Q15052 776 aa15.99■□□□□ 0.15
CIT-214ENST00000544588 OTOP1Q7RTM1 612 aa15.99■□□□□ 0.15
CIT-214ENST00000544588 DHX36Q9H2U1 1008 aaKnown RBP15.99■□□□□ 0.15
CIT-214ENST00000544588 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms