RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 SPRYD7Q5W111 196 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 HS2ST1Q7LGA3 356 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 AMIGO3Q86WK7 504 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
CPSF7-222ENST00000544585 DNAJC2Q99543 621 aaKnown RBP8.29□□□□□ -1.08
CPSF7-222ENST00000544585 GRIP2Q9C0E4 1043 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 MEGF6O75095 1541 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
CPSF7-222ENST00000544585 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 GOLGB1Q14789 3259 aaKnown RBP8.28□□□□□ -1.08
CPSF7-222ENST00000544585 INSRP06213 1382 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 KIF24Q5T7B8 1368 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 TNFRSF21O75509 655 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 DPEP1P16444 411 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 CDK11BP21127 795 aaKnown RBP8.28□□□□□ -1.08
CPSF7-222ENST00000544585 C4orf17Q53FE4 359 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 IER5Q5VY09 327 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 BICDL1Q6ZP65 573 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 SMIM5Q71RC9 77 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 ZNF438Q7Z4V0 828 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 USP48Q86UV5 1035 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 IFNL2Q8IZJ0 200 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 DHX38Q92620 1227 aaKnown RBP8.28□□□□□ -1.08
CPSF7-222ENST00000544585 CCDC74AQ96AQ1 378 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 KLF16Q9BXK1 252 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-222ENST00000544585 C12orf49Q9H741 205 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 NEUROD4Q9HD90 331 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 ZDHHC3Q9NYG2 299 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
CPSF7-222ENST00000544585 DDX41Q9UJV9 622 aaKnown RBP8.28□□□□□ -1.08
CPSF7-222ENST00000544585 GPC6Q9Y625 555 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-222ENST00000544585 LTN1O94822 1766 aa8.27□□□□□ -1.08
CPSF7-222ENST00000544585 MON2Q7Z3U7 1717 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 RFC4P35249 363 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 IDH3AP50213 366 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 ARID5AQ03989 594 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 ZNF394Q53GI3 561 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 ZNF697Q5TEC3 545 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 NBPF10Q6P3W6 841 aaKnown RBP8.27□□□□□ -1.09
CPSF7-222ENST00000544585 VPS37DQ86XT2 251 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 SNX29Q8TEQ0 813 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 ARMC5Q96C12 935 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 RRAGCQ9HB90 399 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 CUEDC1Q9NWM3 386 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-222ENST00000544585 GGT7Q9UJ14 662 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
CPSF7-222ENST00000544585 ST20-MTHFSA0A0A6YYL1 179 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 KCNA3P22001 575 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 RNF144AP50876 292 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-222ENST00000544585 ARSDP51689 593 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 ITPK1Q13572 414 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 DALRD3Q5D0E6 543 aaKnown RBP8.26□□□□□ -1.09
CPSF7-222ENST00000544585 PDE12Q6L8Q7 609 aaKnown RBP8.26□□□□□ -1.09
CPSF7-222ENST00000544585 XKR5Q6UX68 686 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
CPSF7-222ENST00000544585 SMC1BQ8NDV3 1235 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 RNF166Q96A37 237 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-222ENST00000544585 TESK2Q96S53 571 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 GMLQ99445 158 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 ATG3Q9NT62 314 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
CPSF7-222ENST00000544585 PCDHGB7Q9Y5F8 929 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 FAM208AQ9UK61 1670 aaKnown RBP8.26□□□□□ -1.09
CPSF7-222ENST00000544585 TUBGCP6Q96RT7 1819 aa8.26□□□□□ -1.09
CPSF7-222ENST00000544585 FLT4P35916 1363 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 TTC24A2A3L6 582 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-222ENST00000544585 ERVV-2B6SEH9 535 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 PHACTR2O75167 634 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 GYS1P13807 737 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 TIMP2P16035 220 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 PHKA2P46019 1235 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 RACK1P63244 317 aaKnown RBP8.25□□□□□ -1.09
CPSF7-222ENST00000544585 TAF1CQ15572 869 aaPredicted RBP8.25□□□□□ -1.09
CPSF7-222ENST00000544585 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
CPSF7-222ENST00000544585 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 EPS8L3Q8TE67 593 aaKnown RBP8.25□□□□□ -1.09
CPSF7-222ENST00000544585 OSBPL7Q9BZF2 842 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 FAM8A1Q9UBU6 413 aa8.25□□□□□ -1.09
CPSF7-222ENST00000544585 DMGDHQ9UI17 866 aaKnown RBP8.25□□□□□ -1.09
CPSF7-222ENST00000544585 PLEKHG2Q9H7P9 1386 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 DOT1LQ8TEK3 1739 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
CPSF7-222ENST00000544585 PHKG2P15735 406 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 HTRA3P83110 453 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 PTPN12Q05209 780 aaKnown RBP8.24□□□□□ -1.09
CPSF7-222ENST00000544585 PI16Q6UXB8 463 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 NOP9Q86U38 636 aaKnown RBP8.24□□□□□ -1.09
CPSF7-222ENST00000544585 C7orf43Q8WVR3 580 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 DCAF5Q96JK2 942 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 HSH2DQ96JZ2 352 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
CPSF7-222ENST00000544585 LNPKQ9C0E8 428 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
CPSF7-222ENST00000544585 POLMQ9NP87 494 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms