RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 RAD9BQ6WBX8 426 aa20.78■□□□□ 0.92
CCT4-204ENST00000544079 TRIML1Q8N9V2 468 aa20.78■□□□□ 0.92
CCT4-204ENST00000544079 BANK1Q8NDB2 785 aa20.78■□□□□ 0.92
CCT4-204ENST00000544079 KAT2BQ92831 832 aa20.78■□□□□ 0.92
CCT4-204ENST00000544079 NFE2L3Q9Y4A8 694 aa20.78■□□□□ 0.92
CCT4-204ENST00000544079 TARSL2A2RTX5 802 aaKnown RBP20.77■□□□□ 0.92
CCT4-204ENST00000544079 SOWAHDA6NJG2 315 aa20.77■□□□□ 0.92
CCT4-204ENST00000544079 ANKRD65E5RJM6 399 aa20.77■□□□□ 0.92
CCT4-204ENST00000544079 TRDNQ13061 729 aa20.77■□□□□ 0.92
CCT4-204ENST00000544079 MTF1Q14872 753 aa20.77■□□□□ 0.92
CCT4-204ENST00000544079 KBTBD3Q8NAB2 608 aa20.77■□□□□ 0.92
CCT4-204ENST00000544079 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.77■□□□□ 0.92
CCT4-204ENST00000544079 DBNLQ9UJU6 430 aaKnown RBP20.77■□□□□ 0.92
CCT4-204ENST00000544079 PCDHA5Q9Y5H7 936 aa20.77■□□□□ 0.92
CCT4-204ENST00000544079 FAM169AQ9Y6X4 670 aa20.77■□□□□ 0.92
CCT4-204ENST00000544079 ZC3H4Q9UPT8 1303 aaKnown RBP20.77■□□□□ 0.92
CCT4-204ENST00000544079 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.77■□□□□ 0.91
CCT4-204ENST00000544079 PDE4BQ07343 736 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 GBP6Q6ZN66 633 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 COPRSQ9NQ92 184 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 A6NNZ2 444 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 MNAT1P51948 309 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 TEFQ10587 303 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 PTPAQ15257 358 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 TUBB8Q3ZCM7 444 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 SLC35F6Q8N357 371 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 IGSF22Q8N9C0 903 aa20.76■□□□□ 0.91
CCT4-204ENST00000544079 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 BMP6P22004 513 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 USP14P54578 494 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 MDM2Q00987 491 aaPredicted RBP20.75■□□□□ 0.91
CCT4-204ENST00000544079 AMPD2Q01433 879 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 DDR1Q08345 913 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 TNNI3KQ59H18 835 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 PPFIBP1Q86W92 1011 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 FOXP4Q8IVH2 680 aaPredicted RBP20.75■□□□□ 0.91
CCT4-204ENST00000544079 COG1Q8WTW3 980 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 FPGT-TNNI3KV9GXZ4 949 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 SETQ01105 290 aaPredicted RBP20.75■□□□□ 0.91
CCT4-204ENST00000544079 PTPN21Q16825 1174 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 CWF19L2Q2TBE0 894 aaKnown RBP20.75■□□□□ 0.91
CCT4-204ENST00000544079 OTUD7BQ6GQQ9 843 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 FAM76AQ8TAV0 307 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 RPGRIP1Q96KN7 1286 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 USP54Q70EL1 1684 aa20.75■□□□□ 0.91
CCT4-204ENST00000544079 ERCC5P28715 1186 aaPredicted RBP20.74■□□□□ 0.91
CCT4-204ENST00000544079 PPFIA1Q13136 1202 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 TTLL5Q6EMB2 1281 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 KCNV1Q6PIU1 500 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 SPATS2Q86XZ4 545 aaKnown RBP20.74■□□□□ 0.91
CCT4-204ENST00000544079 PRPF38AQ8NAV1 312 aaKnown RBP20.74■□□□□ 0.91
CCT4-204ENST00000544079 MYO6Q9UM54 1294 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 DDX60Q8IY21 1712 aaKnown RBP20.74■□□□□ 0.91
CCT4-204ENST00000544079 FER1L4A9Z1Z3 1794 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 PBX1P40424 430 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 STIM1Q13586 685 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 CNGA4Q8IV77 575 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 MAN1B1Q9UKM7 699 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 SUFUQ9UMX1 484 aa20.74■□□□□ 0.91
CCT4-204ENST00000544079 C21orf2O43822 256 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
CCT4-204ENST00000544079 MARCKSP29966 332 aaPredicted RBP20.73■□□□□ 0.91
CCT4-204ENST00000544079 CDC27P30260 824 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 HOXC9P31274 260 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 LIG3P49916 1009 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 IRAK1P51617 712 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 NOA1Q8NC60 698 aaKnown RBP20.73■□□□□ 0.91
CCT4-204ENST00000544079 PLEKHA4Q9H4M7 779 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 KCNH3Q9ULD8 1083 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 OVOS2A0A0G2JMS6 1433 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 PIK3C2AO00443 1686 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 SARSP49591 514 aaKnown RBP20.73■□□□□ 0.91
CCT4-204ENST00000544079 MORC3Q14149 939 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 LONRF3Q496Y0 759 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 TMTC1Q8IUR5 882 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 FBXO41Q8TF61 875 aa20.73■□□□□ 0.91
CCT4-204ENST00000544079 TEX13AQ9BXU3 409 aaPredicted RBP20.73■□□□□ 0.91
CCT4-204ENST00000544079 ROBO2Q9HCK4 1378 aa20.72■□□□□ 0.91
CCT4-204ENST00000544079 SHTN1A0MZ66 631 aa20.72■□□□□ 0.91
CCT4-204ENST00000544079 MFAP3LO75121 409 aa20.72■□□□□ 0.91
CCT4-204ENST00000544079 ANXA1P04083 346 aa20.72■□□□□ 0.91
CCT4-204ENST00000544079 INPP5BP32019 993 aa20.72■□□□□ 0.91
CCT4-204ENST00000544079 CLIC6Q96NY7 704 aa20.72■□□□□ 0.91
CCT4-204ENST00000544079 ITIH6Q6UXX5 1313 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 WDR19Q8NEZ3 1342 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 SEMA3EO15041 775 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 CCT5P48643 541 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 FMR1Q06787 632 aaKnown RBP eCLIP20.71■□□□□ 0.913e-8■□□□□ 9.6
CCT4-204ENST00000544079 ZMYM1Q5SVZ6 1142 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 MAP3K14Q99558 947 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 CTAGE1Q96RT6 745 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 C4BP0C0L5 1744 aa20.71■□□□□ 0.91
CCT4-204ENST00000544079 HSPD1P10809 573 aaKnown RBP20.7■□□□□ 0.9
CCT4-204ENST00000544079 PLCD1P51178 756 aa20.7■□□□□ 0.9
CCT4-204ENST00000544079 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
CCT4-204ENST00000544079 RBL2Q08999 1139 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms