RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SDR42E1Q8WUS8 393 aa17.38■□□□□ 0.37
TNFRSF1A-216ENST00000543995 FAM151AQ8WW52 585 aa17.38■□□□□ 0.37
TNFRSF1A-216ENST00000543995 STRBPQ96SI9 672 aaKnown RBP17.38■□□□□ 0.37
TNFRSF1A-216ENST00000543995 TMEM39BQ9GZU3 492 aa17.38■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CNTNAP1P78357 1384 aa17.38■□□□□ 0.37
TNFRSF1A-216ENST00000543995 FLT1P17948 1338 aa17.38■□□□□ 0.37
TNFRSF1A-216ENST00000543995 PRKAB2O43741 272 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 ITGBL1O95965 494 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 RUFY2Q8WXA3 655 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 DDRGK1Q96HY6 314 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 MYH1P12882 1939 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 NAV1Q8NEY1 1877 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 APPP05067 770 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 GNAT2P19087 354 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 NF2P35240 595 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CASC1Q6TDU7 716 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CDCA5Q96FF9 252 aa17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 OSBPL5Q9H0X9 879 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CDC45O75419 566 aa17.36■□□□□ 0.37
TNFRSF1A-216ENST00000543995 MFAP1P55081 439 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-216ENST00000543995 FMR1Q06787 632 aaKnown RBP eCLIP17.36■□□□□ 0.37
TNFRSF1A-216ENST00000543995 SAP30BPQ9UHR5 308 aaKnown RBP17.36■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 TRPM7Q96QT4 1865 aa17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 BAZ2AQ9UIF9 1905 aaKnown RBP17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 ZNF589Q86UQ0 364 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 ATP8A2Q9NTI2 1148 aa17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 MCM9Q9NXL9 1143 aa17.35■□□□□ 0.37
TNFRSF1A-216ENST00000543995 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 NBPF12Q5TAG4 269 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CDAN1Q8IWY9 1227 aa17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 TEPSINQ96N21 525 aa17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CSRNP1Q96S65 589 aa17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 DCP1AQ9NPI6 582 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 PALD1Q9ULE6 856 aa17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 RAD50Q92878 1312 aa17.34■□□□□ 0.37
TNFRSF1A-216ENST00000543995 DDTLA6NHG4 134 aaPredicted RBP17.33■□□□□ 0.37
TNFRSF1A-216ENST00000543995 GSG1L2A8MUP6 293 aa17.33■□□□□ 0.37
TNFRSF1A-216ENST00000543995 PATL2C9JE40 543 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1A-216ENST00000543995 CELF2O95319 508 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1A-216ENST00000543995 AMOTL1Q8IY63 956 aa17.33■□□□□ 0.37
TNFRSF1A-216ENST00000543995 NACAP1Q9BZK3 213 aa17.33■□□□□ 0.37
TNFRSF1A-216ENST00000543995 DHX36Q9H2U1 1008 aaKnown RBP17.33■□□□□ 0.37
TNFRSF1A-216ENST00000543995 PASKQ96RG2 1323 aa17.33■□□□□ 0.36
TNFRSF1A-216ENST00000543995 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 HLA-DOAP06340 250 aa17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 TDO2P48775 406 aa17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 VPS53Q5VIR6 699 aa17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 HOOK2Q96ED9 719 aa17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 MKRN1Q9UHC7 482 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 COL2A1P02458 1487 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 ATRNL1Q5VV63 1379 aa17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 DDX60LQ5H9U9 1706 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-216ENST00000543995 PRKG1Q13976 671 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 TTLL12Q14166 644 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 TTC6Q86TZ1 520 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 IFNL3Q8IZI9 196 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 NAPBQ9H115 298 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 SGSM2O43147 1006 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 HSPD1P10809 573 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 DCAF15Q66K64 600 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 GIMAP6Q6P9H5 292 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 MIGA2Q7L4E1 593 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 ESYT1Q9BSJ8 1104 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 TRIM34Q9BYJ4 488 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 IL25Q9H293 177 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 PI4KBQ9UBF8 816 aa17.31■□□□□ 0.36
TNFRSF1A-216ENST00000543995 USP17L12C9JPN9 530 aa17.3■□□□□ 0.36
TNFRSF1A-216ENST00000543995 USP17L21D6R901 530 aa17.3■□□□□ 0.36
TNFRSF1A-216ENST00000543995 PPP1R12BO60237 982 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-216ENST00000543995 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
TNFRSF1A-216ENST00000543995 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-216ENST00000543995 GBA2Q9HCG7 927 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-216ENST00000543995 ARPP21Q9UBL0 812 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-216ENST00000543995 SSC5DA1L4H1 1573 aa17.29■□□□□ 0.36
TNFRSF1A-216ENST00000543995 MINDY4BA8MYZ0 360 aa17.29■□□□□ 0.36
TNFRSF1A-216ENST00000543995 CST9Q5W186 159 aa17.29■□□□□ 0.36
TNFRSF1A-216ENST00000543995 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
TNFRSF1A-216ENST00000543995 C2orf69Q8N8R5 385 aa17.29■□□□□ 0.36
TNFRSF1A-216ENST00000543995 FZD1Q9UP38 647 aa17.29■□□□□ 0.36
TNFRSF1A-216ENST00000543995 LAMB1P07942 1786 aa17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 CYP2D6P10635 497 aa17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 PLCD1P51178 756 aa17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.28■□□□□ 0.362e-7■■■□□ 17.4
TNFRSF1A-216ENST00000543995 ANGEL1Q9UNK9 670 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 PAPPA2Q9BXP8 1791 aa17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
TNFRSF1A-216ENST00000543995 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.36
TNFRSF1A-216ENST00000543995 TMEM88BA6NKF7 163 aa17.27■□□□□ 0.36
TNFRSF1A-216ENST00000543995 FOXP2O15409 715 aa17.27■□□□□ 0.36
TNFRSF1A-216ENST00000543995 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms