RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MYL10Q9BUA6 226 aa19.89■□□□□ 0.77
PTPRO-209ENST00000543886 IRS2Q9Y4H2 1338 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 SERPINB2P05120 415 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 SPTY2D1Q68D10 685 aaPredicted RBP19.88■□□□□ 0.77
PTPRO-209ENST00000543886 BRAPQ7Z569 592 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 ESR2Q92731 530 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 ZKSCAN3Q9BRR0 538 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 ALG1Q9BT22 464 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 FTOQ9C0B1 505 aaKnown RBP eCLIP19.88■□□□□ 0.77
PTPRO-209ENST00000543886 TNMDQ9H2S6 317 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 ZBTB22O15209 634 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 CCDC192P0DO97 292 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 IARSP41252 1262 aaKnown RBP19.88■□□□□ 0.77
PTPRO-209ENST00000543886 UVSSAQ2YD98 709 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 TMTC2Q8N394 836 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 FUCA2Q9BTY2 467 aa19.88■□□□□ 0.77
PTPRO-209ENST00000543886 NID2Q14112 1375 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 BAZ2AQ9UIF9 1905 aaKnown RBP19.87■□□□□ 0.77
PTPRO-209ENST00000543886 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
PTPRO-209ENST00000543886 PRDX5P30044 214 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 DZIP1Q86YF9 867 aaKnown RBP19.87■□□□□ 0.77
PTPRO-209ENST00000543886 PDLIM2Q96JY6 352 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 CRNKL1Q9BZJ0 848 aaKnown RBP19.87■□□□□ 0.77
PTPRO-209ENST00000543886 RRAGDQ9NQL2 400 aaPredicted RBP19.87■□□□□ 0.77
PTPRO-209ENST00000543886 ECM29Q5VYK3 1845 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 DUOX1Q9NRD9 1551 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 CAMK4Q16566 473 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 ZNF804AQ7Z570 1209 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 PHKBQ93100 1093 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 RBM17Q96I25 401 aaKnown RBP19.87■□□□□ 0.77
PTPRO-209ENST00000543886 CLSTN2Q9H4D0 955 aa19.87■□□□□ 0.77
PTPRO-209ENST00000543886 AATFQ9NY61 560 aaKnown RBP eCLIP19.87■□□□□ 0.77
PTPRO-209ENST00000543886 CRY2Q49AN0 593 aa19.86■□□□□ 0.77
PTPRO-209ENST00000543886 JAG2Q9Y219 1238 aa19.86■□□□□ 0.77
PTPRO-209ENST00000543886 STK36Q9NRP7 1315 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 NR1I2O75469 434 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 PCP11498 1178 aaKnown RBP19.85■□□□□ 0.77
PTPRO-209ENST00000543886 SSRP1Q08945 709 aaKnown RBP19.85■□□□□ 0.77
PTPRO-209ENST00000543886 TRIM29Q14134 588 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 NTRK3Q16288 839 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 WDR66Q8TBY9 1149 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 GJB4Q9NTQ9 266 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 FAM217BQ9NTX9 383 aaPredicted RBP19.85■□□□□ 0.77
PTPRO-209ENST00000543886 RTEL1Q9NZ71 1219 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 POLR3DP05423 398 aaPredicted RBP19.85■□□□□ 0.77
PTPRO-209ENST00000543886 ME1P48163 572 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 KIF23Q02241 960 aaPredicted RBP19.85■□□□□ 0.77
PTPRO-209ENST00000543886 RTN1Q16799 776 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
PTPRO-209ENST00000543886 RANBP6O60518 1105 aaKnown RBP19.84■□□□□ 0.77
PTPRO-209ENST00000543886 RCAN1P53805 252 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 TXNRD1Q16881 649 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 CTR9Q6PD62 1173 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 CCAR1Q8IX12 1150 aaKnown RBP19.84■□□□□ 0.77
PTPRO-209ENST00000543886 WASF1Q92558 559 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 AIFM3Q96NN9 605 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 SLC26A6Q9BXS9 759 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 ATP8A2Q9NTI2 1148 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 LAMB1P07942 1786 aa19.84■□□□□ 0.77
PTPRO-209ENST00000543886 CYP2D7A0A087X1C5 515 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 CCDC196A0A1B0GTZ2 297 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 ESPNB1AK53 854 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 IGSF3O75054 1194 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 FMNL1O95466 1100 aaPredicted RBP19.83■□□□□ 0.77
PTPRO-209ENST00000543886 MYSM1Q5VVJ2 828 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 CCDC73Q6ZRK6 1079 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 SLC51AQ86UW1 340 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 TNKSO95271 1327 aa19.83■□□□□ 0.77
PTPRO-209ENST00000543886 USP17L12C9JPN9 530 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 USP17L21D6R901 530 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 LDHBP07195 334 aaKnown RBP19.83■□□□□ 0.76
PTPRO-209ENST00000543886 GPSM2P81274 684 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 GNL2Q13823 731 aaKnown RBP19.83■□□□□ 0.76
PTPRO-209ENST00000543886 STK38Q15208 465 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 KRT40Q6A162 431 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 C15orf52Q6ZUT6 534 aaKnown RBP19.83■□□□□ 0.76
PTPRO-209ENST00000543886 TRIM22Q8IYM9 498 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 ZNF654Q8IZM8 581 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 TDRD7Q8NHU6 1098 aaKnown RBP19.83■□□□□ 0.76
PTPRO-209ENST00000543886 POLR3EQ9NVU0 708 aa19.83■□□□□ 0.76
PTPRO-209ENST00000543886 KIF28PB7ZC32 967 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 SLC3A2P08195 630 aaKnown RBP19.82■□□□□ 0.76
PTPRO-209ENST00000543886 IFNAR1P17181 557 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 SF3A1Q15459 793 aaKnown RBP19.82■□□□□ 0.76
PTPRO-209ENST00000543886 CKAP2LQ8IYA6 745 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 KCNG4Q8TDN1 519 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 DCP1AQ9NPI6 582 aaPredicted RBP19.82■□□□□ 0.76
PTPRO-209ENST00000543886 TAOK2Q9UL54 1235 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 UFL1O94874 794 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 YEATS4O95619 227 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 ATP2B4P23634 1241 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 DDR1Q08345 913 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 RBM43Q6ZSC3 357 aaKnown RBP19.82■□□□□ 0.76
PTPRO-209ENST00000543886 NUP133Q8WUM0 1156 aa19.82■□□□□ 0.76
PTPRO-209ENST00000543886 ZSCAN10Q96SZ4 725 aaPredicted RBP19.82■□□□□ 0.76
PTPRO-209ENST00000543886 ARPP21Q9UBL0 812 aaPredicted RBP19.82■□□□□ 0.76
PTPRO-209ENST00000543886 SMIM22K7EJ46 135 aa19.81■□□□□ 0.76
PTPRO-209ENST00000543886 GSTO1P78417 241 aa19.81■□□□□ 0.76
PTPRO-209ENST00000543886 TYRO3Q06418 890 aa19.81■□□□□ 0.76
PTPRO-209ENST00000543886 SEC23AQ15436 765 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms