RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ZNF512BQ96KM6 892 aaPredicted RBP20.13■□□□□ 0.81
CCND1-205ENST00000542367 DDX4Q9NQI0 724 aaKnown RBP20.13■□□□□ 0.81
CCND1-205ENST00000542367 ZBTB40Q9NUA8 1239 aa20.13■□□□□ 0.81
CCND1-205ENST00000542367 RFX7Q2KHR2 1363 aa20.12■□□□□ 0.81
CCND1-205ENST00000542367 DDTLA6NHG4 134 aaPredicted RBP20.12■□□□□ 0.81
CCND1-205ENST00000542367 IRF6O14896 467 aa20.12■□□□□ 0.81
CCND1-205ENST00000542367 CYP2E1P05181 493 aaPredicted RBP20.12■□□□□ 0.81
CCND1-205ENST00000542367 ERC1Q8IUD2 1116 aa20.12■□□□□ 0.81
CCND1-205ENST00000542367 RPAP2Q8IXW5 612 aaPredicted RBP20.12■□□□□ 0.81
CCND1-205ENST00000542367 ZAP70P43403 619 aa20.11■□□□□ 0.81
CCND1-205ENST00000542367 PPATQ06203 517 aa20.11■□□□□ 0.81
CCND1-205ENST00000542367 PPIL2Q13356 520 aa20.11■□□□□ 0.81
CCND1-205ENST00000542367 PKN2Q16513 984 aaKnown RBP20.11■□□□□ 0.81
CCND1-205ENST00000542367 HSP90AB4PQ58FF6 505 aa20.11■□□□□ 0.81
CCND1-205ENST00000542367 MAP4K4O95819 1239 aaPredicted RBP20.1■□□□□ 0.81
CCND1-205ENST00000542367 CETPP11597 493 aa20.1■□□□□ 0.81
CCND1-205ENST00000542367 SNAPC2Q13487 334 aa20.1■□□□□ 0.81
CCND1-205ENST00000542367 NAA16Q6N069 864 aaPredicted RBP20.1■□□□□ 0.81
CCND1-205ENST00000542367 SIRT2Q8IXJ6 389 aa20.1■□□□□ 0.81
CCND1-205ENST00000542367 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
CCND1-205ENST00000542367 ATRNL1Q5VV63 1379 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 PHF20L1A8MW92 1017 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 HMMRO75330 724 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 SLURP2P0DP57 97 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 MAP3K10Q02779 954 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 NOL9Q5SY16 702 aaKnown RBP20.09■□□□□ 0.81
CCND1-205ENST00000542367 C20orf194Q5TEA3 1177 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 AACSQ86V21 672 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.09■□□□□ 0.81
CCND1-205ENST00000542367 CHMP4BQ9H444 224 aaKnown RBP20.09■□□□□ 0.81
CCND1-205ENST00000542367 IL1RAPL2Q9NP60 686 aa20.09■□□□□ 0.81
CCND1-205ENST00000542367 NPM3O75607 178 aaKnown RBP20.08■□□□□ 0.81
CCND1-205ENST00000542367 PDE3AQ14432 1141 aa20.08■□□□□ 0.81
CCND1-205ENST00000542367 TAF1CQ15572 869 aaPredicted RBP20.08■□□□□ 0.81
CCND1-205ENST00000542367 RHPN1Q8TCX5 695 aa20.08■□□□□ 0.81
CCND1-205ENST00000542367 NOL10Q9BSC4 688 aaKnown RBP20.08■□□□□ 0.81
CCND1-205ENST00000542367 ZFYVE28Q9HCC9 887 aa20.08■□□□□ 0.81
CCND1-205ENST00000542367 PIH1D3Q9NQM4 214 aaKnown RBP20.08■□□□□ 0.81
CCND1-205ENST00000542367 DOCK2Q92608 1830 aa20.07■□□□□ 0.8
CCND1-205ENST00000542367 BTBD19C9JJ37 291 aa20.07■□□□□ 0.8
CCND1-205ENST00000542367 APBB1O00213 710 aa20.07■□□□□ 0.8
CCND1-205ENST00000542367 TEX11Q8IYF3 940 aa20.07■□□□□ 0.8
CCND1-205ENST00000542367 SH3RF3Q8TEJ3 882 aaPredicted RBP20.07■□□□□ 0.8
CCND1-205ENST00000542367 AATFQ9NY61 560 aaKnown RBP eCLIP20.07■□□□□ 0.8
CCND1-205ENST00000542367 HPS5Q9UPZ3 1129 aa20.07■□□□□ 0.8
CCND1-205ENST00000542367 BAG3O95817 575 aa20.06■□□□□ 0.8
CCND1-205ENST00000542367 SP3Q02447 781 aa20.06■□□□□ 0.8
CCND1-205ENST00000542367 FBXO46Q6PJ61 603 aaPredicted RBP20.06■□□□□ 0.8
CCND1-205ENST00000542367 SCYL3Q8IZE3 742 aa20.06■□□□□ 0.8
CCND1-205ENST00000542367 KIF1BPQ96EK5 621 aa20.06■□□□□ 0.8
CCND1-205ENST00000542367 ERO1AQ96HE7 468 aa20.06■□□□□ 0.8
CCND1-205ENST00000542367 TRIM17Q9Y577 477 aa20.06■□□□□ 0.8
CCND1-205ENST00000542367 NDUFB9Q9Y6M9 179 aa20.06■□□□□ 0.8
CCND1-205ENST00000542367 MYO5AQ9Y4I1 1855 aaKnown RBP20.05■□□□□ 0.8
CCND1-205ENST00000542367 IGSF3O75054 1194 aa20.05■□□□□ 0.8
CCND1-205ENST00000542367 PPP4CP60510 307 aa20.05■□□□□ 0.8
CCND1-205ENST00000542367 ADGRA1Q86SQ6 560 aa20.05■□□□□ 0.8
CCND1-205ENST00000542367 CD99L2Q8TCZ2 262 aa20.05■□□□□ 0.8
CCND1-205ENST00000542367 OSBPL5Q9H0X9 879 aaPredicted RBP20.05■□□□□ 0.8
CCND1-205ENST00000542367 KCNH4Q9UQ05 1017 aa20.05■□□□□ 0.8
CCND1-205ENST00000542367 TBC1D12O60347 775 aa20.04■□□□□ 0.8
CCND1-205ENST00000542367 IDH1O75874 414 aaKnown RBP20.04■□□□□ 0.8
CCND1-205ENST00000542367 RGS19P49795 217 aa20.04■□□□□ 0.8
CCND1-205ENST00000542367 OTOP1Q7RTM1 612 aa20.04■□□□□ 0.8
CCND1-205ENST00000542367 CLASRPQ8N2M8 674 aaKnown RBP20.04■□□□□ 0.8
CCND1-205ENST00000542367 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
CCND1-205ENST00000542367 ZCCHC17Q9NP64 241 aaKnown RBP20.04■□□□□ 0.8
CCND1-205ENST00000542367 PICK1Q9NRD5 415 aa20.04■□□□□ 0.8
CCND1-205ENST00000542367 ZHX2Q9Y6X8 837 aa20.04■□□□□ 0.8
CCND1-205ENST00000542367 FAM196BA6NMK8 535 aa20.03■□□□□ 0.8
CCND1-205ENST00000542367 CTNND1O60716 968 aaKnown RBP20.03■□□□□ 0.8
CCND1-205ENST00000542367 RAB11FIP3O75154 756 aa20.03■□□□□ 0.8
CCND1-205ENST00000542367 PLCG2P16885 1265 aa20.03■□□□□ 0.8
CCND1-205ENST00000542367 PTPRAP18433 802 aa20.03■□□□□ 0.8
CCND1-205ENST00000542367 CYP7A1P22680 504 aa20.03■□□□□ 0.8
CCND1-205ENST00000542367 ANTXR1Q9H6X2 564 aa20.03■□□□□ 0.8
CCND1-205ENST00000542367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.03■□□□□ 0.8
CCND1-205ENST00000542367 CXCL11O14625 94 aa20.02■□□□□ 0.8
CCND1-205ENST00000542367 TGFBRAP1Q8WUH2 860 aa20.02■□□□□ 0.8
CCND1-205ENST00000542367 MAST2Q6P0Q8 1798 aa20.02■□□□□ 0.8
CCND1-205ENST00000542367 COL2A1P02458 1487 aaPredicted RBP20.01■□□□□ 0.79
CCND1-205ENST00000542367 TLR2O60603 784 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 IFIT2P09913 472 aaKnown RBP20.01■□□□□ 0.79
CCND1-205ENST00000542367 DYNLL1P63167 89 aaKnown RBP20.01■□□□□ 0.79
CCND1-205ENST00000542367 CAP1Q01518 475 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 MOGSQ13724 837 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 ANKRD23Q86SG2 305 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 MAPKAPK5Q8IW41 473 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 MAGEB6Q8N7X4 407 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 EFCC1Q9HA90 598 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 AFG3L2Q9Y4W6 797 aa20.01■□□□□ 0.79
CCND1-205ENST00000542367 PDHXO00330 501 aa20■□□□□ 0.79
CCND1-205ENST00000542367 SOX10P56693 466 aa20■□□□□ 0.79
CCND1-205ENST00000542367 MLLT1Q03111 559 aaPredicted RBP20■□□□□ 0.79
CCND1-205ENST00000542367 MAP3K12Q12852 859 aa20■□□□□ 0.79
CCND1-205ENST00000542367 DHX36Q9H2U1 1008 aaKnown RBP20■□□□□ 0.79
CCND1-205ENST00000542367 PI4KBQ9UBF8 816 aa20■□□□□ 0.79
CCND1-205ENST00000542367 MIGA1Q8NAN2 632 aa19.99■□□□□ 0.79
CCND1-205ENST00000542367 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.99■□□□□ 0.79
CCND1-205ENST00000542367 PTPN22Q9Y2R2 807 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms