RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 GPBP1L1Q9HC44 474 aaPredicted RBP18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 DDX4Q9NQI0 724 aaKnown RBP18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 PPP2R3BQ9Y5P8 575 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 DDX60LQ5H9U9 1706 aaKnown RBP18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 POLR2AP24928 1970 aaKnown RBP18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 MYH1P12882 1939 aa18.59■□□□□ 0.57
LRTOMT-219ENST00000541899 NAV1Q8NEY1 1877 aa18.58■□□□□ 0.57
LRTOMT-219ENST00000541899 ASTN2O75129 1339 aaPredicted RBP18.58■□□□□ 0.57
LRTOMT-219ENST00000541899 YY1P25490 414 aa18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 LDHDQ86WU2 507 aa18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 ZNF526Q8TF50 670 aaPredicted RBP18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 DCPSQ96C86 337 aaKnown RBP18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 OSBPL5Q9H0X9 879 aaPredicted RBP18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 VEZTQ9HBM0 779 aa18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 EPB41L4AQ9HCS5 686 aaPredicted RBP18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 GGA3Q9NZ52 723 aa18.58■□□□□ 0.56
LRTOMT-219ENST00000541899 CNTNAP1P78357 1384 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 ATRNL1Q5VV63 1379 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 TCP10L2B9ZVM9 353 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 APPP05067 770 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 CACNB3P54284 484 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 SBK1Q52WX2 424 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 EAPPQ56P03 285 aaPredicted RBP18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 MAPKAPK5Q8IW41 473 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 DHX36Q9H2U1 1008 aaKnown RBP18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 TAOK2Q9UL54 1235 aa18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 BAZ2AQ9UIF9 1905 aaKnown RBP18.57■□□□□ 0.56
LRTOMT-219ENST00000541899 FGAP02671 866 aa18.56■□□□□ 0.56
LRTOMT-219ENST00000541899 PTH1RQ03431 593 aa18.56■□□□□ 0.56
LRTOMT-219ENST00000541899 PICALMQ13492 652 aa18.56■□□□□ 0.56
LRTOMT-219ENST00000541899 DEFB129Q9H1M3 183 aa18.56■□□□□ 0.56
LRTOMT-219ENST00000541899 ANO2Q9NQ90 1003 aa18.56■□□□□ 0.56
LRTOMT-219ENST00000541899 ARPP21Q9UBL0 812 aaPredicted RBP18.56■□□□□ 0.56
LRTOMT-219ENST00000541899 CTNNA3Q9UI47 895 aa18.56■□□□□ 0.56
LRTOMT-219ENST00000541899 RASA3Q14644 834 aa18.55■□□□□ 0.56
LRTOMT-219ENST00000541899 CTR9Q6PD62 1173 aa18.55■□□□□ 0.56
LRTOMT-219ENST00000541899 NAPBQ9H115 298 aa18.55■□□□□ 0.56
LRTOMT-219ENST00000541899 MCM9Q9NXL9 1143 aa18.55■□□□□ 0.56
LRTOMT-219ENST00000541899 U3KPZ7 1027 aaPredicted RBP18.55■□□□□ 0.56
LRTOMT-219ENST00000541899 TDO2P48775 406 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 TCP10Q12799 353 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 CDC37L1Q7L3B6 337 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 TTC6Q86TZ1 520 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 SULF1Q8IWU6 871 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 ZFPM1Q8IX07 1006 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 TEPSINQ96N21 525 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 BACH2Q9BYV9 841 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 ANAPC4Q9UJX5 808 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 CLEC11AQ9Y240 323 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 LAMB1P07942 1786 aa18.54■□□□□ 0.56
LRTOMT-219ENST00000541899 USP17L12C9JPN9 530 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 USP17L21D6R901 530 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 KIF3CO14782 793 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 POTEIP0CG38 1075 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 POTEJP0CG39 1038 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 C12orf60Q5U649 245 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 SH3BP5LQ7L8J4 393 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 KRT26Q7Z3Y9 468 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 METTL16Q86W50 562 aaKnown RBP18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 AMOTL1Q8IY63 956 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 USP26Q9BXU7 913 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 PI4KBQ9UBF8 816 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 LAMA4Q16363 1823 aa18.53■□□□□ 0.56
LRTOMT-219ENST00000541899 DDTLA6NHG4 134 aaPredicted RBP18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 SEC24BO95487 1268 aa18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 POLR3DP05423 398 aaPredicted RBP18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 MAP3K10Q02779 954 aa18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 NECTIN1Q15223 517 aa18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 FOXP4Q8IVH2 680 aaPredicted RBP18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 ZNF784Q8NCA9 323 aaPredicted RBP18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 HOOK2Q96ED9 719 aa18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 TMEM39BQ9GZU3 492 aa18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 EHD4Q9H223 541 aa18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 PALD1Q9ULE6 856 aa18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 RBM8AQ9Y5S9 174 aaKnown RBP18.52■□□□□ 0.56
LRTOMT-219ENST00000541899 TBC1D12O60347 775 aa18.51■□□□□ 0.55
LRTOMT-219ENST00000541899 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
LRTOMT-219ENST00000541899 CHADLQ6NUI6 762 aa18.51■□□□□ 0.55
LRTOMT-219ENST00000541899 SAP30BPQ9UHR5 308 aaKnown RBP18.51■□□□□ 0.55
LRTOMT-219ENST00000541899 ROBO3Q96MS0 1386 aa18.51■□□□□ 0.55
LRTOMT-219ENST00000541899 SIPA1L1O43166 1804 aa18.51■□□□□ 0.55
LRTOMT-219ENST00000541899 ZNF213O14771 459 aa18.5■□□□□ 0.55
LRTOMT-219ENST00000541899 PLCD1P51178 756 aa18.5■□□□□ 0.55
LRTOMT-219ENST00000541899 IMMTQ16891 758 aaKnown RBP18.5■□□□□ 0.55
LRTOMT-219ENST00000541899 SUPT20HL1Q3ZLR7 823 aa18.5■□□□□ 0.55
LRTOMT-219ENST00000541899 USP48Q86UV5 1035 aa18.5■□□□□ 0.55
LRTOMT-219ENST00000541899 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
LRTOMT-219ENST00000541899 KCNB2Q92953 911 aa18.5■□□□□ 0.55
LRTOMT-219ENST00000541899 HSPA4P34932 840 aa18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 GABPAQ06546 454 aa18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 PPARAQ07869 468 aa18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 TSGA10IPQ3SY00 556 aa18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 MAP1SQ66K74 1059 aaPredicted RBP18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 CSRNP1Q96S65 589 aa18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 HERC5Q9UII4 1024 aaKnown RBP18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 SCAF8Q9UPN6 1271 aaKnown RBP18.49■□□□□ 0.55
LRTOMT-219ENST00000541899 MINDY4BA8MYZ0 360 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 TOMM70O94826 608 aa18.48■□□□□ 0.55
LRTOMT-219ENST00000541899 SLC3A2P08195 630 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms