RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SH2B2O14492 632 aaPredicted RBP17.33■□□□□ 0.36
VARS2-211ENST00000541562 SLC5A1P13866 664 aa17.33■□□□□ 0.36
VARS2-211ENST00000541562 SFPQP23246 707 aaKnown RBP eCLIP17.33■□□□□ 0.36
VARS2-211ENST00000541562 FANCCQ00597 558 aa17.33■□□□□ 0.36
VARS2-211ENST00000541562 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.36
VARS2-211ENST00000541562 CIAO1O76071 339 aa17.33■□□□□ 0.36
VARS2-211ENST00000541562 CYP2D6P10635 497 aa17.33■□□□□ 0.36
VARS2-211ENST00000541562 NCBP1Q09161 790 aaKnown RBP17.33■□□□□ 0.36
VARS2-211ENST00000541562 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.36
VARS2-211ENST00000541562 ARMCX5Q6P1M9 558 aa17.33■□□□□ 0.36
VARS2-211ENST00000541562 NBPF11Q86T75 865 aa17.33■□□□□ 0.36
VARS2-211ENST00000541562 AATFQ9NY61 560 aaKnown RBP eCLIP17.33■□□□□ 0.36
VARS2-211ENST00000541562 IGHMBP2P38935 993 aaKnown RBP17.32■□□□□ 0.36
VARS2-211ENST00000541562 CHRNDQ07001 517 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 EPSTI1Q96J88 318 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 BLZF1Q9H2G9 400 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 WNT7AO00755 349 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 ZFYP08048 801 aaPredicted RBP17.32■□□□□ 0.36
VARS2-211ENST00000541562 PUM3Q15397 648 aaKnown RBP17.32■□□□□ 0.36
VARS2-211ENST00000541562 LY9Q9HBG7 655 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 SRP68Q9UHB9 627 aaKnown RBP17.32■□□□□ 0.36
VARS2-211ENST00000541562 FAM170AA1A519 330 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 PLEKHA8P1O95397 391 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 RTN1Q16799 776 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 EARS2Q5JPH6 523 aaKnown RBP17.32■□□□□ 0.36
VARS2-211ENST00000541562 AXDND1Q5T1B0 1012 aaPredicted RBP17.32■□□□□ 0.36
VARS2-211ENST00000541562 RASGRP2Q7LDG7 609 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 RASGRP4Q8TDF6 673 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 KCNG4Q8TDN1 519 aa17.32■□□□□ 0.36
VARS2-211ENST00000541562 SALL1Q9NSC2 1324 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 SLIT3O75094 1523 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 CSF1RP07333 972 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 AKAP17AQ02040 695 aaKnown RBP17.31■□□□□ 0.36
VARS2-211ENST00000541562 ERCC6LQ2NKX8 1250 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 KCNH3Q9ULD8 1083 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 PCNTO95613 3336 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 ITPK1Q13572 414 aa17.31■□□□□ 0.36
VARS2-211ENST00000541562 RAD21O60216 631 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 URI1O94763 535 aaPredicted RBP17.3■□□□□ 0.36
VARS2-211ENST00000541562 ERFEQ4G0M1 354 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 ALDH8A1Q9H2A2 487 aaPredicted RBP17.3■□□□□ 0.36
VARS2-211ENST00000541562 FAM217BQ9NTX9 383 aaPredicted RBP17.3■□□□□ 0.36
VARS2-211ENST00000541562 ADAMTS3O15072 1205 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 CCZ1BP86790 482 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 CCZ1P86791 482 aaPredicted RBP17.3■□□□□ 0.36
VARS2-211ENST00000541562 IRX2Q9BZI1 471 aaPredicted RBP17.3■□□□□ 0.36
VARS2-211ENST00000541562 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 DDB1Q16531 1140 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 FAM98CQ17RN3 349 aaKnown RBP17.3■□□□□ 0.36
VARS2-211ENST00000541562 RASSF8Q8NHQ8 419 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 LPIN2Q92539 896 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 HINFPQ9BQA5 517 aa17.3■□□□□ 0.36
VARS2-211ENST00000541562 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
VARS2-211ENST00000541562 A0A0U1RQJ8 604 aa17.29■□□□□ 0.36
VARS2-211ENST00000541562 SAFBQ15424 915 aaKnown RBP eCLIP17.29■□□□□ 0.36
VARS2-211ENST00000541562 ATRIPQ8WXE1 791 aa17.29■□□□□ 0.36
VARS2-211ENST00000541562 TFRCP02786 760 aaKnown RBP17.29■□□□□ 0.36
VARS2-211ENST00000541562 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
VARS2-211ENST00000541562 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
VARS2-211ENST00000541562 METTL16Q86W50 562 aaKnown RBP17.29■□□□□ 0.36
VARS2-211ENST00000541562 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
VARS2-211ENST00000541562 ERICH4A6NGS2 130 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 CTAGE5O15320 804 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 OLFM4Q6UX06 510 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 CCDC94Q9BW85 323 aaPredicted RBP17.28■□□□□ 0.36
VARS2-211ENST00000541562 USP17L12C9JPN9 530 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 USP17L21D6R901 530 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
VARS2-211ENST00000541562 AGXT2Q9BYV1 514 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
VARS2-211ENST00000541562 SLC39A14Q15043 492 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 TRIM22Q8IYM9 498 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 TRERF1Q96PN7 1200 aa17.28■□□□□ 0.36
VARS2-211ENST00000541562 CCT6AP40227 531 aaKnown RBP17.27■□□□□ 0.36
VARS2-211ENST00000541562 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
VARS2-211ENST00000541562 MTF1Q14872 753 aa17.27■□□□□ 0.36
VARS2-211ENST00000541562 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
VARS2-211ENST00000541562 JCADQ9P266 1359 aa17.27■□□□□ 0.36
VARS2-211ENST00000541562 TNKSO95271 1327 aa17.27■□□□□ 0.36
VARS2-211ENST00000541562 E4F1Q66K89 784 aaPredicted RBP17.27■□□□□ 0.35
VARS2-211ENST00000541562 GPKOWQ92917 476 aaPredicted RBP eCLIP17.27■□□□□ 0.357e-6■■■■■ 33.4
VARS2-211ENST00000541562 COL5A2P05997 1499 aaPredicted RBP17.27■□□□□ 0.35
VARS2-211ENST00000541562 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.35
VARS2-211ENST00000541562 BMP6P22004 513 aa17.27■□□□□ 0.35
VARS2-211ENST00000541562 MCM7P33993 719 aa17.27■□□□□ 0.35
VARS2-211ENST00000541562 SIK1P57059 783 aa17.27■□□□□ 0.35
VARS2-211ENST00000541562 CSRNP2Q9H175 543 aa17.27■□□□□ 0.35
VARS2-211ENST00000541562 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 TPM3P06753 285 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
VARS2-211ENST00000541562 NLRP12P59046 1061 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 LZTFL1Q9NQ48 299 aa17.26■□□□□ 0.35
VARS2-211ENST00000541562 SAP30BPQ9UHR5 308 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms