RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 CBX8Q9HC52 389 aa7.33□□□□□ -1.24
PRKDC-210ENST00000541488 TMEM39AQ9NV64 488 aa7.33□□□□□ -1.24
PRKDC-210ENST00000541488 DAGLAQ9Y4D2 1042 aa7.33□□□□□ -1.24
PRKDC-210ENST00000541488 ZNF862O60290 1169 aa7.32□□□□□ -1.24
PRKDC-210ENST00000541488 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
PRKDC-210ENST00000541488 GSTP1P09211 210 aaKnown RBP7.32□□□□□ -1.24
PRKDC-210ENST00000541488 PPP2R3AQ06190 1150 aa7.32□□□□□ -1.24
PRKDC-210ENST00000541488 FMR1Q06787 632 aaKnown RBP eCLIP7.32□□□□□ -1.242e-11■■□□□ 14.1
PRKDC-210ENST00000541488 ZNF792Q3KQV3 632 aa7.32□□□□□ -1.24
PRKDC-210ENST00000541488 SULF2Q8IWU5 870 aa7.32□□□□□ -1.24
PRKDC-210ENST00000541488 OSBPL7Q9BZF2 842 aa7.32□□□□□ -1.24
PRKDC-210ENST00000541488 SEMA6CQ9H3T2 930 aa7.32□□□□□ -1.24
PRKDC-210ENST00000541488 ZFYVE1Q9HBF4 777 aa7.32□□□□□ -1.24
PRKDC-210ENST00000541488 FAM170BA6NMN3 283 aa7.31□□□□□ -1.24
PRKDC-210ENST00000541488 DYNC1LI2O43237 492 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-210ENST00000541488 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
PRKDC-210ENST00000541488 PLCL1Q15111 1095 aa7.31□□□□□ -1.24
PRKDC-210ENST00000541488 MAP1SQ66K74 1059 aaPredicted RBP7.31□□□□□ -1.24
PRKDC-210ENST00000541488 MPRIPQ6WCQ1 1025 aa7.31□□□□□ -1.24
PRKDC-210ENST00000541488 FAM168AQ92567 244 aa7.31□□□□□ -1.24
PRKDC-210ENST00000541488 PRKAG2Q9UGJ0 569 aa7.31□□□□□ -1.24
PRKDC-210ENST00000541488 TMPRSS2O15393 492 aa7.3□□□□□ -1.24
PRKDC-210ENST00000541488 PDIA4P13667 645 aaKnown RBP7.3□□□□□ -1.24
PRKDC-210ENST00000541488 ATP2B2Q01814 1243 aa7.3□□□□□ -1.24
PRKDC-210ENST00000541488 EZH1Q92800 747 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-210ENST00000541488 RNGTTO60942 597 aaKnown RBP7.29□□□□□ -1.24
PRKDC-210ENST00000541488 ZNF574Q6ZN55 896 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-210ENST00000541488 LCNL1Q6ZST4 164 aa7.29□□□□□ -1.24
PRKDC-210ENST00000541488 C3orf58Q8NDZ4 430 aa7.29□□□□□ -1.24
PRKDC-210ENST00000541488 ACSS3Q9H6R3 686 aa7.29□□□□□ -1.24
PRKDC-210ENST00000541488 PIDD1Q9HB75 910 aa7.29□□□□□ -1.24
PRKDC-210ENST00000541488 LRRC4CQ9HCJ2 640 aa7.29□□□□□ -1.24
PRKDC-210ENST00000541488 RNF19AQ9NV58 838 aa7.29□□□□□ -1.24
PRKDC-210ENST00000541488 ZC3H7BQ9UGR2 993 aaKnown RBP7.29□□□□□ -1.24
PRKDC-210ENST00000541488 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-210ENST00000541488 PAGE1O75459 146 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 LDHBP07195 334 aaKnown RBP7.28□□□□□ -1.24
PRKDC-210ENST00000541488 SLFN14P0C7P3 912 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 XRCC5P13010 732 aaKnown RBP7.28□□□□□ -1.24
PRKDC-210ENST00000541488 HCLS1P14317 486 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-210ENST00000541488 GSTT1P30711 240 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 ID3Q02535 119 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 MESP2Q0VG99 397 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 MAP7Q14244 749 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 ALG1LQ6GMV1 187 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 ZAR1Q86SH2 424 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 PDZD3Q86UT5 571 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 GRIN3AQ8TCU5 1115 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 ACSBG1Q96GR2 724 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 FANCD2OSQ96PS1 177 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 CSADQ9Y600 493 aa7.28□□□□□ -1.24
PRKDC-210ENST00000541488 ARNTP27540 789 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 CFPP27918 469 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 TTLL4Q14679 1199 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 ZNF765Q7L2R6 523 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 ATG4DQ86TL0 474 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-210ENST00000541488 C1QL4Q86Z23 238 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 WFDC3Q8IUB2 231 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 GPBAR1Q8TDU6 330 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 FBF1Q8TES7 1133 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 TMEM40Q8WWA1 233 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 NECAB3Q96P71 396 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-210ENST00000541488 CRIM1Q9NZV1 1036 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 JAG2Q9Y219 1238 aa7.27□□□□□ -1.25
PRKDC-210ENST00000541488 USP17L7P0C7H9 530 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 NME2P22392 152 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 CDK5R2Q13319 367 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 KIF4BQ2VIQ3 1234 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 BCL7CQ8WUZ0 217 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-210ENST00000541488 GATA6Q92908 595 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 FAM84AQ96KN4 292 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 TOX2Q96NM4 488 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 SPG7Q9UQ90 795 aa7.26□□□□□ -1.25
PRKDC-210ENST00000541488 ANKRD33BA6NCL7 494 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 ENC1O14682 589 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 CELA3AP09093 270 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 RASIP1Q5U651 963 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 ATXN3LQ9H3M9 355 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 GSX1Q9H4S2 264 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-210ENST00000541488 C12orf49Q9H741 205 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 SSU72Q9NP77 194 aaKnown RBP7.25□□□□□ -1.25
PRKDC-210ENST00000541488 DISC1Q9NRI5 854 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 C1GALT1Q9NS00 363 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 SLC5A6Q9Y289 635 aa7.25□□□□□ -1.25
PRKDC-210ENST00000541488 PATL2C9JE40 543 aaKnown RBP7.24□□□□□ -1.25
PRKDC-210ENST00000541488 SPRED2Q7Z698 418 aa7.24□□□□□ -1.25
PRKDC-210ENST00000541488 SMYD4Q8IYR2 804 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-210ENST00000541488 BHLHE22Q8NFJ8 381 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-210ENST00000541488 KRT82Q9NSB4 513 aa7.24□□□□□ -1.25
PRKDC-210ENST00000541488 LMCD1Q9NZU5 365 aa7.24□□□□□ -1.25
PRKDC-210ENST00000541488 TTF2Q9UNY4 1162 aaKnown RBP7.24□□□□□ -1.25
PRKDC-210ENST00000541488 PCDHGC5Q9Y5F6 944 aa7.24□□□□□ -1.25
PRKDC-210ENST00000541488 DCDC2CA8MYV0 355 aa7.23□□□□□ -1.25
PRKDC-210ENST00000541488 BMP6P22004 513 aa7.23□□□□□ -1.25
PRKDC-210ENST00000541488 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
PRKDC-210ENST00000541488 SEZ6L2Q6UXD5 910 aa7.23□□□□□ -1.25
PRKDC-210ENST00000541488 SND1Q7KZF4 910 aaKnown RBP eCLIP7.23□□□□□ -1.25
PRKDC-210ENST00000541488 EMILIN2Q9BXX0 1053 aa7.23□□□□□ -1.25
PRKDC-210ENST00000541488 SRCIN1Q9C0H9 1055 aa7.23□□□□□ -1.25
PRKDC-210ENST00000541488 RC3H2Q9HBD1 1191 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms