RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 SLC39A14Q15043 492 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 TTC39AQ5SRH9 613 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 FHOD1Q9Y613 1164 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 FANCGO15287 622 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 NRDCO43847 1150 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 SERPINC1P01008 464 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 BMS1Q14692 1282 aaKnown RBP12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 TRIM65Q6PJ69 517 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 PI16Q6UXB8 463 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 AMIGO3Q86WK7 504 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 NCOA7Q8NI08 942 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 CEP126Q9P2H0 1117 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
PHACTR3-209ENST00000541461 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 PLSCR1O15162 318 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 RXRAP19793 462 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 CCDC158Q5M9N0 1113 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 RALYLQ86SE5 291 aaKnown RBP12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 PROM2Q8N271 834 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 XAGE2Q96GT9 111 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 CLIC6Q96NY7 704 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 UTP14AQ9BVJ6 771 aaKnown RBP12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 TUBE1Q9UJT0 475 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 ERICH4A6NGS2 130 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 ZNF213O14771 459 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 CIAO1O76071 339 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 ZAP70P43403 619 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 CFAP100Q494V2 611 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 CCDC87Q9NVE4 849 aa12.14□□□□□ -0.47
PHACTR3-209ENST00000541461 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 REXO1L1PQ8IX06 675 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 ALG1Q9BT22 464 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 TMX1Q9H3N1 280 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 HPSEQ9Y251 543 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 LY75O60449 1722 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
PHACTR3-209ENST00000541461 URI1O94763 535 aaPredicted RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 PNMA6AP0CW24 399 aaPredicted RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 MYL5Q02045 173 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 HSP90AA4PQ58FG1 418 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 FAM177A1Q8N128 213 aaPredicted RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 UBXN4Q92575 508 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 PHKBQ93100 1093 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 SENP2Q9HC62 589 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 FANCLQ9NW38 375 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 C4AP0C0L4 1744 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 C4BP0C0L5 1744 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 GPAA1O43292 621 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 TUBB4AP04350 444 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 ZFYP08048 801 aaPredicted RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 COL5A3P25940 1745 aaPredicted RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 DHX8Q14562 1220 aaKnown RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 PTPAQ15257 358 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 HLFQ16534 295 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 KRT40Q6A162 431 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 FOXP4Q8IVH2 680 aaPredicted RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 CCDC191Q8NCU4 936 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 APPBP2Q92624 585 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 NOL10Q9BSC4 688 aaKnown RBP12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 CARD6Q9BX69 1037 aa12.12□□□□□ -0.47
PHACTR3-209ENST00000541461 CCP110O43303 1012 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 CBFA2T2O43439 604 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 CDC27P30260 824 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 SF3B2Q13435 895 aaKnown RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 GNL2Q13823 731 aaKnown RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 LRRFIP1Q32MZ4 808 aaKnown RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 LONRF3Q496Y0 759 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 METTL16Q86W50 562 aaKnown RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 MNS1Q8NEH6 495 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 SRCAPQ6ZRS2 3230 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 UBE2Q2LH0YL09 131 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 ZBTB22O15209 634 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 GNPATO15228 680 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 FOXN1O15353 648 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 METAP2P50579 478 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 PDE4BQ07343 736 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 INTS13Q9NVM9 706 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
PHACTR3-209ENST00000541461 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms