RNA–Protein interactions for RNA: ENST00000541386.5

RAP1B-225, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-225ENST00000541386 PRRT2Q7Z6L0 340 aaPredicted RBP22.46■■□□□ 1.19
RAP1B-225ENST00000541386 PXYLP1Q8TE99 480 aa22.46■■□□□ 1.19
RAP1B-225ENST00000541386 PTPRAP18433 802 aa22.45■■□□□ 1.18
RAP1B-225ENST00000541386 AFG3L2Q9Y4W6 797 aa22.45■■□□□ 1.18
RAP1B-225ENST00000541386 ATRNL1Q5VV63 1379 aa22.45■■□□□ 1.18
RAP1B-225ENST00000541386 CUL9Q8IWT3 2517 aa22.45■■□□□ 1.18
RAP1B-225ENST00000541386 SLC5A1P13866 664 aa22.44■■□□□ 1.18
RAP1B-225ENST00000541386 ZEB1P37275 1124 aaPredicted RBP22.44■■□□□ 1.18
RAP1B-225ENST00000541386 IRF5Q13568 498 aa22.44■■□□□ 1.18
RAP1B-225ENST00000541386 GADL1Q6ZQY3 521 aa22.44■■□□□ 1.18
RAP1B-225ENST00000541386 SCYL3Q8IZE3 742 aa22.44■■□□□ 1.18
RAP1B-225ENST00000541386 LPIN2Q92539 896 aa22.44■■□□□ 1.18
RAP1B-225ENST00000541386 PAWRQ96IZ0 340 aaKnown RBP22.44■■□□□ 1.18
RAP1B-225ENST00000541386 PAK6Q9NQU5 681 aaPredicted RBP22.44■■□□□ 1.18
RAP1B-225ENST00000541386 DOCK1Q14185 1865 aa22.43■■□□□ 1.18
RAP1B-225ENST00000541386 TNPO2O14787 897 aaKnown RBP22.43■■□□□ 1.18
RAP1B-225ENST00000541386 CRISPLD2Q9H0B8 497 aa22.43■■□□□ 1.18
RAP1B-225ENST00000541386 PICK1Q9NRD5 415 aa22.43■■□□□ 1.18
RAP1B-225ENST00000541386 EYA2O00167 538 aa22.42■■□□□ 1.18
RAP1B-225ENST00000541386 LDHBP07195 334 aaKnown RBP22.42■■□□□ 1.18
RAP1B-225ENST00000541386 SLURP2P0DP57 97 aa22.42■■□□□ 1.18
RAP1B-225ENST00000541386 CAPN2P17655 700 aa22.42■■□□□ 1.18
RAP1B-225ENST00000541386 RFX5P48382 616 aaPredicted RBP22.42■■□□□ 1.18
RAP1B-225ENST00000541386 SLC45A1Q9Y2W3 748 aa22.42■■□□□ 1.18
RAP1B-225ENST00000541386 RGS3P49796 1198 aa22.41■■□□□ 1.18
RAP1B-225ENST00000541386 SH3BP5LQ7L8J4 393 aa22.41■■□□□ 1.18
RAP1B-225ENST00000541386 DIS3LQ8TF46 1054 aaKnown RBP22.41■■□□□ 1.18
RAP1B-225ENST00000541386 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
RAP1B-225ENST00000541386 TAOK2Q9UL54 1235 aa22.41■■□□□ 1.18
RAP1B-225ENST00000541386 MAP3K10Q02779 954 aa22.4■■□□□ 1.18
RAP1B-225ENST00000541386 ATG9AQ7Z3C6 839 aa22.4■■□□□ 1.18
RAP1B-225ENST00000541386 SMCR8Q8TEV9 937 aaPredicted RBP22.4■■□□□ 1.18
RAP1B-225ENST00000541386 GDF15Q99988 308 aa22.4■■□□□ 1.18
RAP1B-225ENST00000541386 MRS2Q9HD23 443 aa22.4■■□□□ 1.18
RAP1B-225ENST00000541386 NECAB2Q7Z6G3 386 aa22.39■■□□□ 1.17
RAP1B-225ENST00000541386 ANKRD13CQ8N6S4 541 aa22.39■■□□□ 1.17
RAP1B-225ENST00000541386 IDI2Q9BXS1 227 aa22.39■■□□□ 1.17
RAP1B-225ENST00000541386 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.39■■□□□ 1.17
RAP1B-225ENST00000541386 LRRFIP2Q9Y608 721 aaKnown RBP22.39■■□□□ 1.17
RAP1B-225ENST00000541386 DDTLA6NHG4 134 aaPredicted RBP22.38■■□□□ 1.17
RAP1B-225ENST00000541386 TRIM75PA6NK02 468 aa22.38■■□□□ 1.17
RAP1B-225ENST00000541386 ENTPD3O75355 529 aa22.38■■□□□ 1.17
RAP1B-225ENST00000541386 BMP8BP34820 402 aa22.38■■□□□ 1.17
RAP1B-225ENST00000541386 MRPL50Q8N5N7 158 aaKnown RBP22.38■■□□□ 1.17
RAP1B-225ENST00000541386 COA7Q96BR5 231 aa22.38■■□□□ 1.17
RAP1B-225ENST00000541386 SALL1Q9NSC2 1324 aa22.37■■□□□ 1.17
RAP1B-225ENST00000541386 CTNND1O60716 968 aaKnown RBP22.37■■□□□ 1.17
RAP1B-225ENST00000541386 CCDC84Q86UT8 332 aaPredicted RBP22.37■■□□□ 1.17
RAP1B-225ENST00000541386 ZSCAN29Q8IWY8 852 aaPredicted RBP22.37■■□□□ 1.17
RAP1B-225ENST00000541386 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.37■■□□□ 1.178e-42■■■■■ 28.4
RAP1B-225ENST00000541386 TREML2Q5T2D2 321 aa22.36■■□□□ 1.17
RAP1B-225ENST00000541386 C7orf61Q8IZ16 206 aa22.36■■□□□ 1.17
RAP1B-225ENST00000541386 GNL3LQ9NVN8 582 aaKnown RBP22.36■■□□□ 1.17
RAP1B-225ENST00000541386 ZMYND8Q9ULU4 1186 aaPredicted RBP22.36■■□□□ 1.17
RAP1B-225ENST00000541386 AGTPBP1Q9UPW5 1226 aa22.36■■□□□ 1.17
RAP1B-225ENST00000541386 RFX7Q2KHR2 1363 aa22.36■■□□□ 1.17
RAP1B-225ENST00000541386 PHKA1P46020 1223 aa22.35■■□□□ 1.17
RAP1B-225ENST00000541386 MNX1P50219 401 aaPredicted RBP22.35■■□□□ 1.17
RAP1B-225ENST00000541386 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
RAP1B-225ENST00000541386 DDX4Q9NQI0 724 aaKnown RBP22.35■■□□□ 1.17
RAP1B-225ENST00000541386 DENND2AQ9ULE3 1009 aa22.35■■□□□ 1.17
RAP1B-225ENST00000541386 PLXNB2O15031 1838 aa22.35■■□□□ 1.17
RAP1B-225ENST00000541386 DDX60LQ5H9U9 1706 aaKnown RBP22.34■■□□□ 1.17
RAP1B-225ENST00000541386 GAKO14976 1311 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 ATAD5Q96QE3 1844 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 FAM110CQ1W6H9 321 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 GPR153Q6NV75 609 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 Q7L0L9 218 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 DEFB123Q8N688 67 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 ANKLE1Q8NAG6 615 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 SIL1Q9H173 461 aa22.34■■□□□ 1.17
RAP1B-225ENST00000541386 LOC285556D6RIA3 1793 aa22.33■■□□□ 1.16
RAP1B-225ENST00000541386 PTPRCP08575 1304 aa22.32■■□□□ 1.16
RAP1B-225ENST00000541386 SEMA3EO15041 775 aa22.32■■□□□ 1.16
RAP1B-225ENST00000541386 SYN1P17600 705 aa22.32■■□□□ 1.16
RAP1B-225ENST00000541386 TRIM32Q13049 653 aa22.32■■□□□ 1.16
RAP1B-225ENST00000541386 PICALMQ13492 652 aa22.32■■□□□ 1.16
RAP1B-225ENST00000541386 CEP126Q9P2H0 1117 aa22.32■■□□□ 1.16
RAP1B-225ENST00000541386 GJD2Q9UKL4 321 aa22.32■■□□□ 1.16
RAP1B-225ENST00000541386 HMGCRP04035 888 aa22.31■■□□□ 1.16
RAP1B-225ENST00000541386 NBPF3Q9H094 633 aa22.31■■□□□ 1.16
RAP1B-225ENST00000541386 PNMA3Q9UL41 463 aa22.31■■□□□ 1.16
RAP1B-225ENST00000541386 RPTORQ8N122 1335 aa22.31■■□□□ 1.16
RAP1B-225ENST00000541386 CIAO1O76071 339 aa22.3■■□□□ 1.16
RAP1B-225ENST00000541386 ADORA1P30542 326 aa22.3■■□□□ 1.16
RAP1B-225ENST00000541386 LRIT3Q3SXY7 679 aa22.3■■□□□ 1.16
RAP1B-225ENST00000541386 PROCA1Q8NCQ7 364 aaPredicted RBP22.3■■□□□ 1.16
RAP1B-225ENST00000541386 FAM163AQ96GL9 167 aaPredicted RBP22.3■■□□□ 1.16
RAP1B-225ENST00000541386 HMX1Q9NP08 348 aaPredicted RBP22.3■■□□□ 1.16
RAP1B-225ENST00000541386 FAM196BA6NMK8 535 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 BTDP43251 543 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 MAGEA10P43363 369 aaPredicted RBP22.29■■□□□ 1.16
RAP1B-225ENST00000541386 SPP2Q13103 211 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 CCDC102BQ68D86 513 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 ZGPATQ8N5A5 531 aaKnown RBP22.29■■□□□ 1.16
RAP1B-225ENST00000541386 MTMR10Q9NXD2 777 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 ABCF2Q9UG63 623 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 FBXO3Q9UK99 471 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 STXBP5LQ9Y2K9 1186 aa22.29■■□□□ 1.16
RAP1B-225ENST00000541386 ZBTB22O15209 634 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms