RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CLEC10AQ8IUN9 316 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 SMG8Q8ND04 991 aaKnown RBP8.63□□□□□ -1.03
SUDS3-202ENST00000541280 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
SUDS3-202ENST00000541280 FAM83CQ9BQN1 747 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 C7orf69Q9H7B7 122 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 LIN7BQ9HAP6 207 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 INO80Q9ULG1 1556 aaPredicted RBP8.63□□□□□ -1.03
SUDS3-202ENST00000541280 SHANK2Q9UPX8 1470 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 DAPK1P53355 1430 aa8.63□□□□□ -1.03
SUDS3-202ENST00000541280 KANK1Q14678 1352 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 PLXNC1O60486 1568 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 TIAF1O95411 115 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 GRIA4P48058 902 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 NFIAQ12857 509 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 USPL1Q5W0Q7 1092 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 RNF43Q68DV7 783 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 FDX2Q6P4F2 183 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 ALKBH8Q96BT7 664 aaKnown RBP8.62□□□□□ -1.03
SUDS3-202ENST00000541280 RBCK1Q9BYM8 510 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 DNAJC25Q9H1X3 360 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 CLEC4MQ9H2X3 399 aaPredicted RBP8.62□□□□□ -1.03
SUDS3-202ENST00000541280 GNEQ9Y223 722 aaKnown RBP8.62□□□□□ -1.03
SUDS3-202ENST00000541280 PTPRKQ15262 1439 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 NCOA1Q15788 1441 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 ERBINQ96RT1 1412 aa8.62□□□□□ -1.03
SUDS3-202ENST00000541280 GPR182O15218 404 aa8.61□□□□□ -1.03
SUDS3-202ENST00000541280 SART1O43290 800 aaKnown RBP8.61□□□□□ -1.03
SUDS3-202ENST00000541280 CPNE3O75131 537 aaKnown RBP8.61□□□□□ -1.03
SUDS3-202ENST00000541280 CD97P48960 835 aa8.61□□□□□ -1.03
SUDS3-202ENST00000541280 TIMELESSQ9UNS1 1208 aa8.61□□□□□ -1.03
SUDS3-202ENST00000541280 RIMS1Q86UR5 1692 aaKnown RBP8.61□□□□□ -1.03
SUDS3-202ENST00000541280 TNRQ92752 1358 aa8.61□□□□□ -1.03
SUDS3-202ENST00000541280 DUOX2Q9NRD8 1548 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 DLGAP3O95886 979 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 BMP3P12645 472 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 ITPKAP23677 461 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 PCDH1Q08174 1060 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 ORC1Q13415 861 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 ANKLE2Q86XL3 938 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 ZDHHC13Q8IUH4 622 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 TRIM42Q8IWZ5 723 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 FBXO41Q8TF61 875 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 DMRTB1Q96MA1 342 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 DBNDD2Q9BQY9 259 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 PTPRTO14522 1441 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 MAST1Q9Y2H9 1570 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 ROCK1Q13464 1354 aa8.6□□□□□ -1.03
SUDS3-202ENST00000541280 SOWAHDA6NJG2 315 aa8.59□□□□□ -1.03
SUDS3-202ENST00000541280 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
SUDS3-202ENST00000541280 ZNF423Q2M1K9 1284 aa8.59□□□□□ -1.03
SUDS3-202ENST00000541280 EXOSC6Q5RKV6 272 aaKnown RBP8.59□□□□□ -1.03
SUDS3-202ENST00000541280 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
SUDS3-202ENST00000541280 PRPF40BQ6NWY9 871 aaKnown RBP8.59□□□□□ -1.03
SUDS3-202ENST00000541280 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
SUDS3-202ENST00000541280 USP26Q9BXU7 913 aa8.59□□□□□ -1.03
SUDS3-202ENST00000541280 CYP4F12Q9HCS2 524 aa8.59□□□□□ -1.03
SUDS3-202ENST00000541280 PZPP20742 1482 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 ARHGAP31Q2M1Z3 1444 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 HMX2A2RU54 273 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 KIAA1324LA8MWY0 1029 aaPredicted RBP8.58□□□□□ -1.04
SUDS3-202ENST00000541280 BRD1O95696 1058 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 B3GALT4O96024 378 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 GSTM4Q03013 218 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 SPRED3Q2MJR0 410 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 BEND4Q6ZU67 534 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 ZNF576Q9H609 170 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 NPHS2Q9NP85 383 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 KDM5DQ9BY66 1539 aa8.58□□□□□ -1.04
SUDS3-202ENST00000541280 SIGLEC1Q9BZZ2 1709 aa8.57□□□□□ -1.04
SUDS3-202ENST00000541280 ADGBQ8N7X0 1667 aa8.57□□□□□ -1.04
SUDS3-202ENST00000541280 EIF1AYO14602 144 aaKnown RBP8.57□□□□□ -1.04
SUDS3-202ENST00000541280 CCDC74AQ96AQ1 378 aa8.57□□□□□ -1.04
SUDS3-202ENST00000541280 SLC52A1Q9NWF4 448 aa8.57□□□□□ -1.04
SUDS3-202ENST00000541280 NLRP1Q9C000 1473 aa8.57□□□□□ -1.04
SUDS3-202ENST00000541280 ANKRD50Q9ULJ7 1429 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 FER1L4A9Z1Z3 1794 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 PTPN23Q9H3S7 1636 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 PRR19A6NJB7 356 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 GAS2O43903 313 aaKnown RBP8.56□□□□□ -1.04
SUDS3-202ENST00000541280 KRTAP4-8Q9BYQ9 185 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 NIF3L1Q9GZT8 377 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 EHD4Q9H223 541 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 ABCB6Q9NP58 842 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 A2ML1A8K2U0 1454 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 PLA2R1Q13018 1463 aa8.56□□□□□ -1.04
SUDS3-202ENST00000541280 COBLO75128 1261 aa8.55□□□□□ -1.04
SUDS3-202ENST00000541280 TGFB1P01137 390 aa8.55□□□□□ -1.04
SUDS3-202ENST00000541280 CYP11A1P05108 521 aa8.55□□□□□ -1.04
SUDS3-202ENST00000541280 MAP4P27816 1152 aaKnown RBP8.55□□□□□ -1.04
SUDS3-202ENST00000541280 HP1BP3Q5SSJ5 553 aaPredicted RBP8.55□□□□□ -1.04
SUDS3-202ENST00000541280 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
SUDS3-202ENST00000541280 TRIM56Q9BRZ2 755 aaKnown RBP8.55□□□□□ -1.04
SUDS3-202ENST00000541280 KCNF1Q9H3M0 494 aa8.55□□□□□ -1.04
SUDS3-202ENST00000541280 EID1Q9Y6B2 187 aa8.55□□□□□ -1.04
SUDS3-202ENST00000541280 SETD1BQ9UPS6 1966 aaKnown RBP8.55□□□□□ -1.04
SUDS3-202ENST00000541280 ITGAEP38570 1179 aa8.54□□□□□ -1.04
SUDS3-202ENST00000541280 SGO2Q562F6 1265 aa8.54□□□□□ -1.04
SUDS3-202ENST00000541280 RPS26P11Q5JNZ5 115 aaPredicted RBP8.54□□□□□ -1.04
SUDS3-202ENST00000541280 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms