RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 C21orf2O43822 256 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 PARP1P09874 1014 aaKnown RBP10.93□□□□□ -0.66
TTC39C-203ENST00000540918 TMEM266Q2M3C6 531 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 ZNF654Q8IZM8 581 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 NLGN1Q8N2Q7 840 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 KCNG4Q8TDN1 519 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 LMBRD1Q9NUN5 540 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 RPS6KA4O75676 772 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 CYP2D6P10635 497 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 CCDC186Q7Z3E2 898 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 CERKQ8TCT0 537 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 GTF3C6Q969F1 213 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 PDCL3Q9H2J4 239 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 TMEM131LA2VDJ0 1609 aa10.93□□□□□ -0.66
TTC39C-203ENST00000540918 TOP1P11387 765 aaKnown RBP10.92□□□□□ -0.66
TTC39C-203ENST00000540918 PDIA3P30101 505 aaKnown RBP10.92□□□□□ -0.66
TTC39C-203ENST00000540918 STAT6P42226 847 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 RRAGBQ5VZM2 374 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 ZSCAN30Q86W11 494 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 SMARCC2Q8TAQ2 1214 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 CAGE1Q8TC20 777 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 LEO1Q8WVC0 666 aaPredicted RBP10.92□□□□□ -0.66
TTC39C-203ENST00000540918 RRP36Q96EU6 259 aaKnown RBP10.92□□□□□ -0.66
TTC39C-203ENST00000540918 MINPP1Q9UNW1 487 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 SMTNL1A8MU46 457 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 CHMP2AO43633 222 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 PLCG2P16885 1265 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 NFIXQ14938 502 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 RASGRP4Q8TDF6 673 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 MTMR6Q9Y217 621 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 ERVV-1B6SEH8 477 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 KRT2P35908 639 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 SLC1A4P43007 532 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 STX1AQ16623 288 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 SLC44A5Q8NCS7 719 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 TMEM87BQ96K49 555 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 ZSWIM5Q9P217 1185 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 MROH1Q8NDA8 1641 aa10.92□□□□□ -0.66
TTC39C-203ENST00000540918 BRD1O95696 1058 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 ADD2P35612 726 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 TXKP42681 527 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 C17orf53Q8N3J3 647 aaPredicted RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 CLIC6Q96NY7 704 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 ISCA1Q9BUE6 129 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 SOS2Q07890 1332 aaPredicted RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 POLR2DO15514 142 aaKnown RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 SORBS3O60504 671 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 UBE4AQ14139 1066 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 CALML4Q96GE6 196 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 KAZALD1Q96I82 304 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 ZNHIT6Q9NWK9 470 aaKnown RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 TECPR2O15040 1411 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 PSDA5PKW4 1024 aaPredicted RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 ALDH1B1P30837 517 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 ATG9AQ7Z3C6 839 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 CCDC12Q8WUD4 166 aaPredicted RBP10.91□□□□□ -0.66
TTC39C-203ENST00000540918 NRKQ7Z2Y5 1582 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 COL15A1P39059 1388 aa10.91□□□□□ -0.66
TTC39C-203ENST00000540918 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
TTC39C-203ENST00000540918 NMT2O60551 498 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 COBLO75128 1261 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 CIAO1O76071 339 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 CHRNA5P30532 468 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 MTIF2P46199 727 aaKnown RBP10.9□□□□□ -0.66
TTC39C-203ENST00000540918 ASIC1P78348 528 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 MECOMQ03112 1051 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 DLGAP5Q15398 846 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 ANO1Q5XXA6 986 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 MAEAQ7L5Y9 396 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 ZSWIM4Q9H7M6 989 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 SPATA31A1Q5TZJ5 1347 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 CDC25AP30304 524 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 PTPN21Q16825 1174 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 GAS2L3Q86XJ1 694 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 NUP88Q99567 741 aaPredicted RBP10.9□□□□□ -0.66
TTC39C-203ENST00000540918 USP17L3A6NCW0 530 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 USP17L4A6NCW7 530 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 DDX39AO00148 427 aaKnown RBP10.9□□□□□ -0.66
TTC39C-203ENST00000540918 PDE6BP35913 854 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 NECTIN1Q15223 517 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 CCDC174Q6PII3 467 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 USP17L1Q7RTZ2 530 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 FANCBQ8NB91 859 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 TEKT1Q969V4 418 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 SCLT1Q96NL6 688 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 RAB34Q9BZG1 259 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 C6orf50Q9HD87 102 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 BIN2Q9UBW5 565 aaPredicted RBP10.9□□□□□ -0.66
TTC39C-203ENST00000540918 NARFQ9UHQ1 456 aa10.9□□□□□ -0.66
TTC39C-203ENST00000540918 GDF11O95390 407 aa10.9□□□□□ -0.67
TTC39C-203ENST00000540918 HMGB2P26583 209 aaKnown RBP10.9□□□□□ -0.67
TTC39C-203ENST00000540918 SLC16A2P36021 539 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms