RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 RANBP6O60518 1105 aaKnown RBP11.13□□□□□ -0.63
LCOR-209ENST00000540664 ADALQ6DHV7 355 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 VPS37DQ86XT2 251 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 CCAR1Q8IX12 1150 aaKnown RBP11.13□□□□□ -0.63
LCOR-209ENST00000540664 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
LCOR-209ENST00000540664 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 ZKSCAN5Q9Y2L8 839 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 SLC12A7Q9Y666 1083 aa11.13□□□□□ -0.63
LCOR-209ENST00000540664 CTAGE5O15320 804 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 ZNF500O60304 480 aaPredicted RBP11.12□□□□□ -0.63
LCOR-209ENST00000540664 IGSF3O75054 1194 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 ADCY5O95622 1261 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 IFNAR1P17181 557 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 ADRA2BP18089 450 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 FAM160A1Q05DH4 1040 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 TRAPPC3LQ5T215 181 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 FAM196AQ6ZSG2 479 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 CKAP2LQ8IYA6 745 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 TMTC2Q8N394 836 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 KCNG4Q8TDN1 519 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 SDR42E1Q8WUS8 393 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 LRRC4BQ9NT99 713 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 PCDHA7Q9UN72 937 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 LAMB1P07942 1786 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 AP5Z1O43299 807 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 FMNL1O95466 1100 aaPredicted RBP11.12□□□□□ -0.63
LCOR-209ENST00000540664 RXRAP19793 462 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 HIBADHP31937 336 aaKnown RBP11.12□□□□□ -0.63
LCOR-209ENST00000540664 KRT40Q6A162 431 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 NFXL1Q6ZNB6 911 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 KRT27Q7Z3Y8 459 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 CLIC4Q9Y696 253 aa11.12□□□□□ -0.63
LCOR-209ENST00000540664 CAVIN2O95810 425 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 U2AF2P26368 475 aaKnown RBP eCLIP11.11□□□□□ -0.637e-7■■■■□ 20.4
LCOR-209ENST00000540664 RFC4P35249 363 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 IARSP41252 1262 aaKnown RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 DYNLL1P63167 89 aaKnown RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 NFIXQ14938 502 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 WTAPQ15007 396 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 SEC23AQ15436 765 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 PHKBQ93100 1093 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 MYL10Q9BUA6 226 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 POLR3DP05423 398 aaPredicted RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 ME1P48163 572 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 MECOMQ03112 1051 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 ANO6Q4KMQ2 910 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 CCDC73Q6ZRK6 1079 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 NBPF11Q86T75 865 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
LCOR-209ENST00000540664 MRPS27Q92552 414 aaKnown RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
LCOR-209ENST00000540664 SPTLC2O15270 562 aa11.1□□□□□ -0.63
LCOR-209ENST00000540664 GRAPQ13588 217 aa11.1□□□□□ -0.63
LCOR-209ENST00000540664 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
LCOR-209ENST00000540664 ANO1Q5XXA6 986 aa11.1□□□□□ -0.63
LCOR-209ENST00000540664 SYNE3Q6ZMZ3 975 aa11.1□□□□□ -0.63
LCOR-209ENST00000540664 FSIP1Q8NA03 581 aa11.1□□□□□ -0.63
LCOR-209ENST00000540664 TDRD7Q8NHU6 1098 aaKnown RBP11.1□□□□□ -0.63
LCOR-209ENST00000540664 GRAPLQ8TC17 118 aaPredicted RBP11.1□□□□□ -0.63
LCOR-209ENST00000540664 ESR2Q92731 530 aa11.1□□□□□ -0.63
LCOR-209ENST00000540664 CBX8Q9HC52 389 aa11.1□□□□□ -0.63
LCOR-209ENST00000540664 SSRP1Q08945 709 aaKnown RBP11.09□□□□□ -0.63
LCOR-209ENST00000540664 SLC39A14Q15043 492 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 PPP2R5BQ15173 497 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 STK38Q15208 465 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 RRP12Q5JTH9 1297 aaKnown RBP11.09□□□□□ -0.63
LCOR-209ENST00000540664 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 C15orf52Q6ZUT6 534 aaKnown RBP11.09□□□□□ -0.63
LCOR-209ENST00000540664 TXNRD3Q86VQ6 643 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 CCDC144CPQ8IYA2 1237 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 ERICH2A1L162 156 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 MINDY4BA8MYZ0 360 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 RTN1Q16799 776 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 CTR9Q6PD62 1173 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 ZNF654Q8IZM8 581 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 WASF1Q92558 559 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 MAP3K14Q99558 947 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 ZKSCAN3Q9BRR0 538 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
LCOR-209ENST00000540664 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
LCOR-209ENST00000540664 TNKSO95271 1327 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 CCDC196A0A1B0GTZ2 297 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 KINO60870 393 aaKnown RBP11.08□□□□□ -0.64
LCOR-209ENST00000540664 PPP6R2O75170 966 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 TRIM37O94972 964 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 PTPAQ15257 358 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 CRY2Q49AN0 593 aa11.08□□□□□ -0.64
LCOR-209ENST00000540664 SLC27A3Q5K4L6 730 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms