RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 FAM177A1Q8N128 213 aaPredicted RBP9.73□□□□□ -0.85
C2CD3-215ENST00000540452 NECAB1Q8N987 351 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 TBC1D16Q8TBP0 767 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 IGDCC4Q8TDY8 1250 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 WASF1Q92558 559 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 MAP3K14Q99558 947 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 MRIQ9BWK5 157 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 CD209Q9NNX6 404 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 CFAP45Q9UL16 551 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 BAZ2AQ9UIF9 1905 aaKnown RBP9.73□□□□□ -0.85
C2CD3-215ENST00000540452 C10orf71Q711Q0 1435 aa9.73□□□□□ -0.85
C2CD3-215ENST00000540452 PSME4Q14997 1843 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 PTPDC1A2A3K4 754 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 GOLGA8BA8MQT2 603 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 CPLX1O14810 134 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 MRE11P49959 708 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 HAND2P61296 217 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 CACNB1Q02641 598 aaPredicted RBP9.72□□□□□ -0.85
C2CD3-215ENST00000540452 C1QBPQ07021 282 aaKnown RBP9.72□□□□□ -0.85
C2CD3-215ENST00000540452 BRAPQ7Z569 592 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 IQCA1Q86XH1 822 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 ZNF784Q8NCA9 323 aaPredicted RBP9.72□□□□□ -0.85
C2CD3-215ENST00000540452 ZNF384Q8TF68 577 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 CNKSR1Q969H4 720 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 TCEANC2Q96MN5 208 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 VPS33BQ9H267 617 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 LY9Q9HBG7 655 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 MKRN1Q9UHC7 482 aaKnown RBP9.72□□□□□ -0.85
C2CD3-215ENST00000540452 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
C2CD3-215ENST00000540452 HPS5Q9UPZ3 1129 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 MROH7-TTC4A0A0A0MT08 1334 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 GAKO14976 1311 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 NEDD4P46934 1319 aa9.72□□□□□ -0.85
C2CD3-215ENST00000540452 GPR75-ASB3A0A0A6YYF3 556 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 VPS37CA5D8V6 355 aaPredicted RBP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 GOLGA6L3A6NEY3 463 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 CCDC69A6NI79 296 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 H3BQV1 296 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 ZBTB43O43298 467 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 MMP10P09238 476 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 KLRK1P26718 216 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 PRDX5P30044 214 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 METAP2P50579 478 aaKnown RBP eCLIP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 PDE4BQ07343 736 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 COL9A3Q14050 684 aaPredicted RBP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 PODNQ7Z5L7 613 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 ADGRA1Q86SQ6 560 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 RTFDC1Q9BY42 306 aaPredicted RBP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 DCP1AQ9NPI6 582 aaPredicted RBP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 ZSWIM5Q9P217 1185 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 RBM27Q9P2N5 1060 aaKnown RBP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.71□□□□□ -0.86
C2CD3-215ENST00000540452 MYO3BQ8WXR4 1341 aa9.71□□□□□ -0.86
C2CD3-215ENST00000540452 B4E1Z4 1266 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 H0YIN7 160 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 IFIT3O14879 490 aaKnown RBP9.7□□□□□ -0.86
C2CD3-215ENST00000540452 KDM4AO75164 1064 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 DDAH1O94760 285 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 CTDNEP1O95476 244 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 IFNAR1P17181 557 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 HDLBPQ00341 1268 aaKnown RBP9.7□□□□□ -0.86
C2CD3-215ENST00000540452 RESTQ13127 1097 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 STK3Q13188 491 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 WTAPQ15007 396 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 CTR9Q6PD62 1173 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 CYB5R4Q7L1T6 521 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 MPNDQ8N594 471 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 MIGA1Q8NAN2 632 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 SUPT20HQ8NEM7 779 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 FBXO18Q8NFZ0 1043 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 ZNF396Q96N95 335 aaPredicted RBP9.7□□□□□ -0.86
C2CD3-215ENST00000540452 UBAC1Q9BSL1 405 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 TCP11L1Q9NUJ3 509 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 RBM28Q9NW13 759 aaKnown RBP9.7□□□□□ -0.86
C2CD3-215ENST00000540452 POLLQ9UGP5 575 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 IQSEC3Q9UPP2 1182 aaPredicted RBP9.7□□□□□ -0.86
C2CD3-215ENST00000540452 SLC12A7Q9Y666 1083 aa9.7□□□□□ -0.86
C2CD3-215ENST00000540452 ZNF646O15015 1829 aaPredicted RBP9.7□□□□□ -0.86
C2CD3-215ENST00000540452 A0A0G2JLW4 131 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 PRKAB2O43741 272 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 MYH1P12882 1939 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 MYH6P13533 1939 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 CHAF1AQ13111 956 aaPredicted RBP9.69□□□□□ -0.86
C2CD3-215ENST00000540452 SEC23AQ15436 765 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 PPP4R3BQ5MIZ7 849 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 ECM29Q5VYK3 1845 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
C2CD3-215ENST00000540452 CDC37L1Q7L3B6 337 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 SNED1Q8TER0 1413 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 ANKS1AQ92625 1134 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
C2CD3-215ENST00000540452 LRRC2Q9BYS8 371 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 ZC3H12CQ9C0D7 883 aaKnown RBP9.69□□□□□ -0.86
C2CD3-215ENST00000540452 SPON1Q9HCB6 807 aa9.69□□□□□ -0.86
C2CD3-215ENST00000540452 BRPF3Q9ULD4 1205 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms