RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 SOX4Q06945 474 aaPredicted RBP6.16□□□□□ -1.42
MDM2-226ENST00000540352 UTP14CQ5TAP6 766 aaKnown RBP6.16□□□□□ -1.42
MDM2-226ENST00000540352 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.16□□□□□ -1.42
MDM2-226ENST00000540352 PDZD3Q86UT5 571 aa6.16□□□□□ -1.42
MDM2-226ENST00000540352 GRIN3AQ8TCU5 1115 aa6.16□□□□□ -1.42
MDM2-226ENST00000540352 ANP32BQ92688 251 aaKnown RBP6.16□□□□□ -1.42
MDM2-226ENST00000540352 YIPF2Q9BWQ6 316 aa6.16□□□□□ -1.42
MDM2-226ENST00000540352 PNNQ9H307 717 aaKnown RBP6.16□□□□□ -1.42
MDM2-226ENST00000540352 ZNF862O60290 1169 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 TIAF1O95411 115 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 RSPO4Q2I0M5 234 aaPredicted RBP6.15□□□□□ -1.43
MDM2-226ENST00000540352 PRR23CQ6ZRP0 262 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 ARMC10Q8N2F6 343 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 GPBAR1Q8TDU6 330 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 WDR89Q96FK6 387 aaPredicted RBP6.15□□□□□ -1.43
MDM2-226ENST00000540352 SEMA6BQ9H3T3 888 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 PIDD1Q9HB75 910 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 PICK1Q9NRD5 415 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 CYP8B1Q9UNU6 501 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 HIF3AQ9Y2N7 669 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 RAXQ9Y2V3 346 aa6.15□□□□□ -1.43
MDM2-226ENST00000540352 F6X3S4 739 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 K7ELQ4 463 aaPredicted RBP6.14□□□□□ -1.43
MDM2-226ENST00000540352 DYRK3O43781 588 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 TRIM37O94972 964 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 H2AFB1P0C5Y9 115 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 H2AFB2P0C5Z0 115 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 RLBP1P12271 317 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 BMP6P22004 513 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 ASPAP45381 313 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 RGS3P49796 1198 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 LIG3P49916 1009 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 ID3Q02535 119 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 MRPL58Q14197 206 aaKnown RBP6.14□□□□□ -1.43
MDM2-226ENST00000540352 KIF4BQ2VIQ3 1234 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 SGO2Q562F6 1265 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 BEND4Q6ZU67 534 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 FAM20CQ8IXL6 584 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 C2CD4AQ8NCU7 369 aaPredicted RBP6.14□□□□□ -1.43
MDM2-226ENST00000540352 NOC4LQ9BVI4 516 aaKnown RBP6.14□□□□□ -1.43
MDM2-226ENST00000540352 STOML1Q9UBI4 398 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 PCDHA4Q9UN74 947 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 ACTL7BQ9Y614 415 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 NACADO15069 1562 aa6.14□□□□□ -1.43
MDM2-226ENST00000540352 RB1CC1Q8TDY2 1594 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 USP31Q70CQ4 1352 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 TMPRSS2O15393 492 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 MAP4P27816 1152 aaKnown RBP6.13□□□□□ -1.43
MDM2-226ENST00000540352 ZNF252P-AS1Q0IIN9 211 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 TSNAXIP1Q2TAA8 658 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 NKAPLQ5M9Q1 402 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 RASIP1Q5U651 963 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 MPRIPQ6WCQ1 1025 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 TMEM87AQ8NBN3 555 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 FBLIM1Q8WUP2 373 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
MDM2-226ENST00000540352 SEPT6Q14141 434 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 NFKBIBQ15653 356 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 L1TD1Q5T7N2 865 aaKnown RBP6.12□□□□□ -1.43
MDM2-226ENST00000540352 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 ELMO3Q96BJ8 720 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 MIR1-1HGQ9H1L0 117 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 FAM105AQ9NUU6 356 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 PPP1R9AQ9ULJ8 1098 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 CSADQ9Y600 493 aa6.12□□□□□ -1.43
MDM2-226ENST00000540352 FAM95CA0A1B0GW59 222 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 UNCXA6NJT0 531 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 RNGTTO60942 597 aaKnown RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 HMGB1P09429 215 aaKnown RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 GBP2P32456 591 aaPredicted RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 RPS26P62854 115 aaKnown RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 PWP1Q13610 501 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 CDPF1Q6NVV7 123 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 PAOXQ6QHF9 649 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 HS2ST1Q7LGA3 356 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 MTERF4Q7Z6M4 381 aaKnown RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 KRTAP1-3Q8IUG1 177 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 RELL1Q8IUW5 271 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 TRIM42Q8IWZ5 723 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 SECISBP2LQ93073 1101 aaKnown RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 MRRFQ96E11 262 aaKnown RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 C7orf69Q9H7B7 122 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 SSU72Q9NP77 194 aaKnown RBP6.11□□□□□ -1.43
MDM2-226ENST00000540352 CRIM1Q9NZV1 1036 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 TLR6Q9Y2C9 796 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 DAGLAQ9Y4D2 1042 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 NCAPD3P42695 1498 aa6.11□□□□□ -1.43
MDM2-226ENST00000540352 SYNGAP1Q96PV0 1343 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.1□□□□□ -1.43
MDM2-226ENST00000540352 HMX2A2RU54 273 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 DCDC2CA8MYV0 355 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 AGMOQ6ZNB7 445 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 CLEC10AQ8IUN9 316 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 FRAT1Q92837 279 aaPredicted RBP6.1□□□□□ -1.43
MDM2-226ENST00000540352 FANCD2OSQ96PS1 177 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 PSMG3-AS1Q96PY0 264 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 LGR6Q9HBX8 967 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 RRAGDQ9NQL2 400 aaPredicted RBP6.1□□□□□ -1.43
MDM2-226ENST00000540352 GGT7Q9UJ14 662 aa6.1□□□□□ -1.43
MDM2-226ENST00000540352 PCDHB5Q9Y5E4 795 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms