RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
UBC-207ENST00000540351 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
UBC-207ENST00000540351 STXBP5LQ9Y2K9 1186 aa16.3■□□□□ 0.2
UBC-207ENST00000540351 CDH23Q9H251 3354 aa16.3■□□□□ 0.2
UBC-207ENST00000540351 MAST3O60307 1309 aa16.29■□□□□ 0.2
UBC-207ENST00000540351 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
UBC-207ENST00000540351 EXOSC9Q06265 439 aaKnown RBP16.29■□□□□ 0.2
UBC-207ENST00000540351 SH3BP5LQ7L8J4 393 aa16.29■□□□□ 0.2
UBC-207ENST00000540351 BICC1Q9H694 974 aaKnown RBP16.29■□□□□ 0.2
UBC-207ENST00000540351 PTPRAP18433 802 aa16.28■□□□□ 0.2
UBC-207ENST00000540351 TCP10Q12799 353 aa16.28■□□□□ 0.2
UBC-207ENST00000540351 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
UBC-207ENST00000540351 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
UBC-207ENST00000540351 PLXNB2O15031 1838 aa16.28■□□□□ 0.2
UBC-207ENST00000540351 DOCK2Q92608 1830 aa16.27■□□□□ 0.2
UBC-207ENST00000540351 TFRCP02786 760 aaKnown RBP16.27■□□□□ 0.2
UBC-207ENST00000540351 CAVIN4Q5BKX8 364 aa16.27■□□□□ 0.2
UBC-207ENST00000540351 SCYL3Q8IZE3 742 aa16.27■□□□□ 0.2
UBC-207ENST00000540351 COL25A1Q9BXS0 654 aaPredicted RBP16.27■□□□□ 0.2
UBC-207ENST00000540351 C9orf78Q9NZ63 289 aaPredicted RBP16.27■□□□□ 0.2
UBC-207ENST00000540351 GJD2Q9UKL4 321 aa16.27■□□□□ 0.2
UBC-207ENST00000540351 COL2A1P02458 1487 aaPredicted RBP16.27■□□□□ 0.19
UBC-207ENST00000540351 TTC28Q96AY4 2481 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 AK9Q5TCS8 1911 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 MYH13Q9UKX3 1938 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 ZBTB22O15209 634 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 PRDX5P30044 214 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
UBC-207ENST00000540351 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 VPS37DQ86XT2 251 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 ANKLE1Q8NAG6 615 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBC-207ENST00000540351 ZHX2Q9Y6X8 837 aa16.26■□□□□ 0.19
UBC-207ENST00000540351 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
UBC-207ENST00000540351 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
UBC-207ENST00000540351 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
UBC-207ENST00000540351 NECAB2Q7Z6G3 386 aa16.25■□□□□ 0.19
UBC-207ENST00000540351 IDI2Q9BXS1 227 aa16.25■□□□□ 0.19
UBC-207ENST00000540351 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
UBC-207ENST00000540351 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.25■□□□□ 0.19
UBC-207ENST00000540351 ZMYND8Q9ULU4 1186 aaPredicted RBP16.25■□□□□ 0.19
UBC-207ENST00000540351 TNPO2O14787 897 aaKnown RBP16.24■□□□□ 0.19
UBC-207ENST00000540351 MAGEA10P43363 369 aaPredicted RBP16.24■□□□□ 0.19
UBC-207ENST00000540351 TRIM32Q13049 653 aa16.24■□□□□ 0.19
UBC-207ENST00000540351 WDR63Q8IWG1 891 aa16.24■□□□□ 0.19
UBC-207ENST00000540351 WDR66Q8TBY9 1149 aa16.24■□□□□ 0.19
UBC-207ENST00000540351 LOC285556D6RIA3 1793 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 GAKO14976 1311 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 PFASO15067 1338 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 PUM3Q15397 648 aaKnown RBP16.23■□□□□ 0.19
UBC-207ENST00000540351 FAM110CQ1W6H9 321 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 TREML2Q5T2D2 321 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 MAP3K21Q5TCX8 1036 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 ATG9AQ7Z3C6 839 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 C7orf61Q8IZ16 206 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 OGDHLQ9ULD0 1010 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 AGTPBP1Q9UPW5 1226 aa16.23■□□□□ 0.19
UBC-207ENST00000540351 DDTLA6NHG4 134 aaPredicted RBP16.22■□□□□ 0.19
UBC-207ENST00000540351 ENTPD3O75355 529 aa16.22■□□□□ 0.19
UBC-207ENST00000540351 FRAT2O75474 233 aaPredicted RBP16.22■□□□□ 0.19
UBC-207ENST00000540351 COL6A1P12109 1028 aa16.22■□□□□ 0.19
UBC-207ENST00000540351 RGS3P49796 1198 aa16.22■□□□□ 0.19
UBC-207ENST00000540351 CCDC84Q86UT8 332 aaPredicted RBP16.22■□□□□ 0.19
UBC-207ENST00000540351 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
UBC-207ENST00000540351 DDX4Q9NQI0 724 aaKnown RBP16.22■□□□□ 0.19
UBC-207ENST00000540351 USP40Q9NVE5 1235 aa16.22■□□□□ 0.19
UBC-207ENST00000540351 POTEB2H3BUK9 544 aa16.21■□□□□ 0.19
UBC-207ENST00000540351 SYN1P17600 705 aa16.21■□□□□ 0.19
UBC-207ENST00000540351 GADL1Q6ZQY3 521 aa16.21■□□□□ 0.19
UBC-207ENST00000540351 ANKRD13CQ8N6S4 541 aa16.21■□□□□ 0.19
UBC-207ENST00000540351 GUCD1Q96NT3 240 aa16.21■□□□□ 0.19
UBC-207ENST00000540351 MYH2Q9UKX2 1941 aa16.21■□□□□ 0.19
UBC-207ENST00000540351 CTNND1O60716 968 aaKnown RBP16.2■□□□□ 0.18
UBC-207ENST00000540351 HMGCRP04035 888 aa16.2■□□□□ 0.18
UBC-207ENST00000540351 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
UBC-207ENST00000540351 SLC4A10Q6U841 1118 aa16.2■□□□□ 0.18
UBC-207ENST00000540351 LPIN2Q92539 896 aa16.2■□□□□ 0.18
UBC-207ENST00000540351 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
UBC-207ENST00000540351 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
UBC-207ENST00000540351 RPTORQ8N122 1335 aa16.19■□□□□ 0.18
UBC-207ENST00000540351 EYA2O00167 538 aa16.19■□□□□ 0.18
UBC-207ENST00000540351 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
UBC-207ENST00000540351 TRIB2Q92519 343 aa16.19■□□□□ 0.18
UBC-207ENST00000540351 COA7Q96BR5 231 aa16.19■□□□□ 0.18
UBC-207ENST00000540351 FAM163AQ96GL9 167 aaPredicted RBP16.19■□□□□ 0.18
UBC-207ENST00000540351 RRP1BQ14684 758 aaKnown RBP16.18■□□□□ 0.18
UBC-207ENST00000540351 FAM109BQ6ICB4 259 aaPredicted RBP16.18■□□□□ 0.18
UBC-207ENST00000540351 C11orf49Q9H6J7 331 aa16.18■□□□□ 0.18
UBC-207ENST00000540351 PICK1Q9NRD5 415 aa16.18■□□□□ 0.18
UBC-207ENST00000540351 TRIM75PA6NK02 468 aa16.17■□□□□ 0.18
UBC-207ENST00000540351 TBC1D12O60347 775 aa16.17■□□□□ 0.18
UBC-207ENST00000540351 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
UBC-207ENST00000540351 RHBDL3P58872 404 aa16.17■□□□□ 0.18
UBC-207ENST00000540351 PROCA1Q8NCQ7 364 aaPredicted RBP16.17■□□□□ 0.18
UBC-207ENST00000540351 SMCR8Q8TEV9 937 aaPredicted RBP16.17■□□□□ 0.18
UBC-207ENST00000540351 MORF4L1Q9UBU8 362 aa16.17■□□□□ 0.18
UBC-207ENST00000540351 SLC5A1P13866 664 aa16.16■□□□□ 0.18
UBC-207ENST00000540351 PHKA1P46020 1223 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms