RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 HIF1AQ16665 826 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 XP32Q5T750 250 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 SYTL4Q96C24 671 aaPredicted RBP5.72□□□□□ -1.49
C2CD3-214ENST00000540057 HINFPQ9BQA5 517 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 GSX2Q9BZM3 304 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 VRTNQ9H8Y1 702 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 NLRP2Q9NX02 1062 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 NAGPAQ9UK23 515 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 SLC6A14Q9UN76 642 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 NFAT5O94916 1531 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 C5P01031 1676 aa5.72□□□□□ -1.49
C2CD3-214ENST00000540057 TAF1LQ8IZX4 1826 aa5.71□□□□□ -1.49
C2CD3-214ENST00000540057 ANKRD36BQ8N2N9 1353 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 N4BP2Q86UW6 1770 aaPredicted RBP5.71□□□□□ -1.5
C2CD3-214ENST00000540057 KCPQ6ZWJ8 1503 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 SRPK2P78362 688 aaKnown RBP5.71□□□□□ -1.5
C2CD3-214ENST00000540057 DOC2BQ14184 412 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 AMIGO3Q86WK7 504 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 SMC1BQ8NDV3 1235 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 FLAD1Q8NFF5 587 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 DDX54Q8TDD1 881 aaKnown RBP5.71□□□□□ -1.5
C2CD3-214ENST00000540057 KLK14Q9P0G3 267 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 C10orf71Q711Q0 1435 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 PKD1L3Q7Z443 1732 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 PXDNLA1KZ92 1463 aa5.71□□□□□ -1.5
C2CD3-214ENST00000540057 TNRC6CQ9HCJ0 1690 aaKnown RBP5.7□□□□□ -1.5
C2CD3-214ENST00000540057 KIF13BQ9NQT8 1826 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 SPDYE3A6NKU9 549 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 FOXN1O15353 648 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 INPP5BP32019 993 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 GATA4P43694 442 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 PRRT3Q5FWE3 981 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 C9orf131Q5VYM1 1079 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 ARHGAP27Q6ZUM4 889 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 SMIM5Q71RC9 77 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 DCAF11Q8TEB1 546 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 UBE2OQ9C0C9 1292 aaKnown RBP5.7□□□□□ -1.5
C2CD3-214ENST00000540057 EFCC1Q9HA90 598 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 TOGARAM1Q9Y4F4 1720 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 KDM2BQ8NHM5 1336 aa5.7□□□□□ -1.5
C2CD3-214ENST00000540057 PLEKHG2Q9H7P9 1386 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 UBR3Q6ZT12 1888 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 KIAA1210Q9ULL0 1709 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 NFKB1P19838 968 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 IDH3AP50213 366 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 TBC1D8BQ0IIM8 1120 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 MYO19Q96H55 970 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 PRDM10Q9NQV6 1147 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 DNAJB12Q9NXW2 375 aaKnown RBP5.69□□□□□ -1.5
C2CD3-214ENST00000540057 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.69□□□□□ -1.5
C2CD3-214ENST00000540057 TTC21BQ7Z4L5 1316 aa5.69□□□□□ -1.5
C2CD3-214ENST00000540057 BRCA1P38398 1863 aaKnown RBP5.68□□□□□ -1.5
C2CD3-214ENST00000540057 USP47Q96K76 1375 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 C4BP0C0L5 1744 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 LTN1O94822 1766 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 A0A0G2JLW4 131 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 DGKZQ13574 1117 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 CCINQ13939 588 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 GRIK4Q16099 956 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 RSPO4Q2I0M5 234 aaPredicted RBP5.68□□□□□ -1.5
C2CD3-214ENST00000540057 ANKRD24Q8TF21 1146 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 TPSG1Q9NRR2 321 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 ZFATQ9P243 1243 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 LRFN2Q9ULH4 789 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 ARFGEF1Q9Y6D6 1849 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 SBF1O95248 1867 aa5.68□□□□□ -1.5
C2CD3-214ENST00000540057 A0A0A0MRY4 1105 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 LILRB5O75023 590 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 MAP3K6O95382 1288 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 RGS19P49795 217 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 TGFB2P61812 414 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 MLLT1Q03111 559 aaPredicted RBP5.67□□□□□ -1.5
C2CD3-214ENST00000540057 NKAPLQ5M9Q1 402 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 NUDT8Q8WV74 236 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 ABHD8Q96I13 439 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 JPH1Q9HDC5 661 aaPredicted RBP5.67□□□□□ -1.5
C2CD3-214ENST00000540057 ZMIZ1Q9ULJ6 1067 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 TTC21AQ8NDW8 1320 aa5.67□□□□□ -1.5
C2CD3-214ENST00000540057 MICAL2O94851 1124 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 MMP10P09238 476 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 SELPP16109 830 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 DPEP1P16444 411 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 ARSDP51689 593 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 AFF1P51825 1210 aaKnown RBP5.66□□□□□ -1.5
C2CD3-214ENST00000540057 TRIM28Q13263 835 aaKnown RBP5.66□□□□□ -1.5
C2CD3-214ENST00000540057 FKBP5Q13451 457 aaPredicted RBP5.66□□□□□ -1.5
C2CD3-214ENST00000540057 CDCA8Q53HL2 280 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 PSAPL1Q6NUJ1 521 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 Q8N3U1 123 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 PNMA5Q96PV4 448 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 SEMA6BQ9H3T3 888 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 IGFLR1Q9H665 355 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 RNF181Q9P0P0 153 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 PALLDQ8WX93 1383 aa5.66□□□□□ -1.5
C2CD3-214ENST00000540057 ZBTB42B2RXF5 422 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 EPB42P16452 691 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 KCNA3P22001 575 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 HMGB2P26583 209 aaKnown RBP5.65□□□□□ -1.5
C2CD3-214ENST00000540057 SSFA2P28290 1259 aa5.65□□□□□ -1.5
C2CD3-214ENST00000540057 CTCFP49711 727 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms