RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 KCNK4Q9NYG8 393 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 SUGT1Q9Y2Z0 365 aa8.28□□□□□ -1.08
MRE11-209ENST00000540013 ADAMTS12P58397 1594 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 LOC100289279A0A1B0GTE1 492 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 MEGF11A6BM72 1044 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 DDX3YO15523 660 aaKnown RBP8.27□□□□□ -1.09
MRE11-209ENST00000540013 NME2P22392 152 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 CCDC181Q5TID7 509 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 EGFLAMQ63HQ2 1017 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 HGSNATQ68CP4 663 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 ANKRD34AQ69YU3 496 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 SCARA3Q6AZY7 606 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 SDE2Q6IQ49 451 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 NRSN2Q9GZP1 204 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 MYH16Q9H6N6 1097 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 CYP4F12Q9HCS2 524 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 RNF19AQ9NV58 838 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 PRKAG2Q9UGJ0 569 aa8.27□□□□□ -1.09
MRE11-209ENST00000540013 ARAP1Q96P48 1450 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 MAOBP27338 520 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 LRRC14Q15048 493 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
MRE11-209ENST00000540013 KIAA1211Q6ZU35 1233 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 SULF2Q8IWU5 870 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 UBASH3BQ8TF42 649 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 ZNF526Q8TF50 670 aaPredicted RBP8.26□□□□□ -1.09
MRE11-209ENST00000540013 SPOCK3Q9BQ16 436 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 TRIM56Q9BRZ2 755 aaKnown RBP8.26□□□□□ -1.09
MRE11-209ENST00000540013 NOC4LQ9BVI4 516 aaKnown RBP8.26□□□□□ -1.09
MRE11-209ENST00000540013 KRT82Q9NSB4 513 aa8.26□□□□□ -1.09
MRE11-209ENST00000540013 USP31Q70CQ4 1352 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 ERICH3Q5RHP9 1530 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 ENC1O14682 589 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 ATP2B1P20020 1258 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 IREB2P48200 963 aaKnown RBP8.25□□□□□ -1.09
MRE11-209ENST00000540013 ZNF157P51786 506 aaPredicted RBP8.25□□□□□ -1.09
MRE11-209ENST00000540013 CCDC85BQ15834 202 aaPredicted RBP8.25□□□□□ -1.09
MRE11-209ENST00000540013 UVSSAQ2YD98 709 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 CCDC144BQ3MJ40 725 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 C9orf131Q5VYM1 1079 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 NUTM2GQ5VZR2 741 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 CYB5RLQ6IPT4 315 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 FDX2Q6P4F2 183 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 Q6ZS46 218 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 GPATCH3Q96I76 525 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 SUGCTQ9HAC7 445 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 TBX22Q9Y458 520 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 GRIN2AQ12879 1464 aa8.25□□□□□ -1.09
MRE11-209ENST00000540013 WISP1O95388 367 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 GSTP1P09211 210 aaKnown RBP8.24□□□□□ -1.09
MRE11-209ENST00000540013 GLB1P16278 677 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 ARNTP27540 789 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 NOS3P29474 1203 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 IGBP1P78318 339 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 DIEXFQ68CQ4 756 aaKnown RBP8.24□□□□□ -1.09
MRE11-209ENST00000540013 TMED8Q6PL24 325 aaPredicted RBP8.24□□□□□ -1.09
MRE11-209ENST00000540013 DHX38Q92620 1227 aaKnown RBP8.24□□□□□ -1.09
MRE11-209ENST00000540013 TMPRSS13Q9BYE2 586 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 CYP8B1Q9UNU6 501 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 SYNGAP1Q96PV0 1343 aa8.24□□□□□ -1.09
MRE11-209ENST00000540013 FHAD1B1AJZ9 1412 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 hCG_2014768A0A024R1R8 64 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 SART1O43290 800 aaKnown RBP8.23□□□□□ -1.09
MRE11-209ENST00000540013 TPD52L2O43399 206 aaKnown RBP8.23□□□□□ -1.09
MRE11-209ENST00000540013 FBXO24O75426 580 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 CTSHP09668 335 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 LMNB1P20700 586 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 PDE3AQ14432 1141 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 PTPROQ16827 1216 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 LDLRAD1Q5T700 205 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 METTL16Q86W50 562 aaKnown RBP8.23□□□□□ -1.09
MRE11-209ENST00000540013 NT5DC4Q86YG4 428 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 KCNB2Q92953 911 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 PRDM16Q9HAZ2 1276 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 RAD18Q9NS91 495 aa8.23□□□□□ -1.09
MRE11-209ENST00000540013 RPS26P62854 115 aaKnown RBP8.22□□□□□ -1.09
MRE11-209ENST00000540013 PWP1Q13610 501 aa8.22□□□□□ -1.09
MRE11-209ENST00000540013 GORABQ5T7V8 394 aa8.22□□□□□ -1.09
MRE11-209ENST00000540013 DZIP1LQ8IYY4 767 aaKnown RBP8.22□□□□□ -1.09
MRE11-209ENST00000540013 AGGF1Q8N302 714 aaeCLIP8.22□□□□□ -1.09
MRE11-209ENST00000540013 SMG8Q8ND04 991 aaKnown RBP8.22□□□□□ -1.09
MRE11-209ENST00000540013 BRINP2Q9C0B6 783 aa8.22□□□□□ -1.09
MRE11-209ENST00000540013 TGIF2Q9GZN2 237 aa8.22□□□□□ -1.09
MRE11-209ENST00000540013 CBX8Q9HC52 389 aa8.22□□□□□ -1.09
MRE11-209ENST00000540013 CEP170Q5SW79 1584 aa8.22□□□□□ -1.09
MRE11-209ENST00000540013 NUP160Q12769 1436 aa8.21□□□□□ -1.09
MRE11-209ENST00000540013 K7ELQ4 463 aaPredicted RBP8.21□□□□□ -1.1
MRE11-209ENST00000540013 SLFN14P0C7P3 912 aa8.21□□□□□ -1.1
MRE11-209ENST00000540013 GTF2F1P35269 517 aaKnown RBP eCLIP8.21□□□□□ -1.1
MRE11-209ENST00000540013 MEI1Q5TIA1 1274 aa8.21□□□□□ -1.1
MRE11-209ENST00000540013 LLGL2Q6P1M3 1020 aa8.21□□□□□ -1.1
MRE11-209ENST00000540013 ALX3O95076 343 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 CELA3AP09093 270 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 PCNX4Q63HM2 1172 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 PDZD3Q86UT5 571 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 EXOC8Q8IYI6 725 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 CCSER2Q9H7U1 834 aa8.2□□□□□ -1.1
MRE11-209ENST00000540013 METTL5Q9NRN9 209 aaKnown RBP8.2□□□□□ -1.1
MRE11-209ENST00000540013 SLC52A1Q9NWF4 448 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms