RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 ANKZF1Q9H8Y5 726 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 SLC40A1Q9NP59 571 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 SLC39A2Q9NP94 309 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 TRMT1Q9NXH9 659 aaKnown RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 TUBA8Q9NY65 449 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-211ENST00000539921 ATP8A1Q9Y2Q0 1164 aa6.95□□□□□ -1.3
SNHG1-211ENST00000539921 TARBP1Q13395 1621 aaKnown RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 PTPRTO14522 1441 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 BIN1O00499 593 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 IKBKBO14920 756 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 FIBPO43427 364 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 CREB3O43889 395 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 KIF5CO60282 957 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 STX10O60499 249 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 DNAJC8O75937 253 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 SYF2O95926 243 aaKnown RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 OATP04181 439 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 GSTA1P08263 222 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 RPL13P26373 211 aaKnown RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 GJA8P48165 433 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 GNL2Q13823 731 aaKnown RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 SEPT2Q15019 361 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 POSTNQ15063 836 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 NEUROD2Q15784 382 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 BZW1Q7L1Q6 419 aaKnown RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 APBB1IPQ7Z5R6 666 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 LCA5Q86VQ0 697 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 CCDC13Q8IYE1 715 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 RNF168Q8IYW5 571 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 MYOCDQ8IZQ8 938 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 FUKQ8N0W3 1084 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 ANKRD44Q8N8A2 993 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 COG1Q8WTW3 980 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 SSH1Q8WYL5 1049 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 CUL5Q93034 780 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 TTC14Q96N46 770 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 TSC22D3Q99576 134 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 MMADHCQ9H3L0 296 aaPredicted RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 UNC45AQ9H3U1 944 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 NRDE2Q9H7Z3 1164 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 CD248Q9HCU0 757 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 DDX25Q9UHL0 483 aaKnown RBP6.94□□□□□ -1.3
SNHG1-211ENST00000539921 LIMCH1Q9UPQ0 1083 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 PHF24Q9UPV7 400 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 TNNQ9UQP3 1299 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 MTMR6Q9Y217 621 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 C15orf41Q9Y2V0 281 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 CDC42BPGQ6DT37 1551 aa6.94□□□□□ -1.3
SNHG1-211ENST00000539921 TCHHQ07283 1943 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 VWA3AA6NCI4 1184 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 GOLGA6L4A6NEF3 574 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 CFAP73A6NFT4 308 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 C19orf67A6NJJ6 358 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 NPHP1O15259 732 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 CEP104O60308 925 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 RNF8O76064 485 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 PYGLP06737 847 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 ZFXP17010 805 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 DESP17661 470 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 SDSP20132 328 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 TRPC1P48995 793 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 NLRP5P59047 1200 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 MRPS35P82673 323 aaKnown RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 USH1GQ495M9 461 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 SH2D4BQ5SQS7 431 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 PRPF40BQ6NWY9 871 aaKnown RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 ARMCX5Q6P1M9 558 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 C6orf89Q6UWU4 347 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 CCAR1Q8IX12 1150 aaKnown RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 PPP2R3CQ969Q6 453 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 CFAP53Q96M91 514 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 CLIC6Q96NY7 704 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 TRAPPC9Q96Q05 1148 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 NAP1L3Q99457 506 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 NAA15Q9BXJ9 866 aaKnown RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 TM6SF1Q9BZW5 370 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 BHMT2Q9H2M3 363 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 ZWILCHQ9H900 591 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 ABCB6Q9NP58 842 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 DACT1Q9NYF0 836 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 NOP53Q9NZM5 478 aaKnown RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 TFIP11Q9UBB9 837 aaKnown RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 HPCAL4Q9UM19 191 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 ZC3H4Q9UPT8 1303 aaKnown RBP6.93□□□□□ -1.3
SNHG1-211ENST00000539921 SBNO1A3KN83 1393 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 OVOS2A0A0G2JMS6 1433 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 OVOS2A0A0J9YW53 1432 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 OVOS2Q6IE36 1432 aa6.93□□□□□ -1.3
SNHG1-211ENST00000539921 MAST1Q9Y2H9 1570 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 IQGAP3Q86VI3 1631 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 GPR75-ASB3A0A0A6YYF3 556 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 GOLGA6L10A0A0M3HER8 536 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 RASSF10A6NK89 507 aa6.92□□□□□ -1.3
SNHG1-211ENST00000539921 E7ENQ6 273 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms