RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 MAP7D1Q3KQU3 841 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 CYP26C1Q6V0L0 522 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 GPR161Q8N6U8 529 aaKnown RBP7.27□□□□□ -1.25
LSAMP-207ENST00000539563 PHACTR3Q96KR7 559 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 SLC52A2Q9HAB3 445 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 SAP30BPQ9UHR5 308 aaKnown RBP7.27□□□□□ -1.25
LSAMP-207ENST00000539563 CTNND2Q9UQB3 1225 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 ARHGEF5Q12774 1597 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 B4E1Z4 1266 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 STX17P56962 302 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 ANO1Q5XXA6 986 aa7.27□□□□□ -1.25
LSAMP-207ENST00000539563 GNPATO15228 680 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 RLBP1P12271 317 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 ZNF174Q15697 407 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 MCTP2Q6DN12 878 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 HDXQ7Z353 690 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 XAGE2Q96GT9 111 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 SMC6Q96SB8 1091 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 ZKSCAN3Q9BRR0 538 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 DDX23Q9BUQ8 820 aaKnown RBP7.26□□□□□ -1.25
LSAMP-207ENST00000539563 KCNG1Q9UIX4 513 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 ODF2LQ9ULJ1 636 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 AGTPBP1Q9UPW5 1226 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 KRT5P13647 590 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 PDE4DQ08499 809 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 ASIC2Q16515 512 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 TRAF5O00463 557 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 STRN3Q13033 797 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 GABPB2Q8TAK5 448 aaPredicted RBP7.26□□□□□ -1.25
LSAMP-207ENST00000539563 ATRIPQ8WXE1 791 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 GPCPD1Q9NPB8 672 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 ZBTB21Q9ULJ3 1066 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 FAM169AQ9Y6X4 670 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 GPAA1O43292 621 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 TIMM10P62072 90 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 MLKLQ8NB16 471 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 A0A1B0GVL5 298 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 POLR2DO15514 142 aaKnown RBP7.26□□□□□ -1.25
LSAMP-207ENST00000539563 TNFAIP3P21580 790 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC117Q8IWD4 279 aaPredicted RBP7.26□□□□□ -1.25
LSAMP-207ENST00000539563 KARSQ15046 597 aaKnown RBP7.26□□□□□ -1.25
LSAMP-207ENST00000539563 DPH6Q7L8W6 267 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC114Q96M63 670 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 SELENOSQ9BQE4 189 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 UFL1O94874 794 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 KBTBD3Q8NAB2 608 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 CFAP57Q96MR6 1250 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 HAUS2Q9NVX0 235 aa7.26□□□□□ -1.25
LSAMP-207ENST00000539563 A6NNZ2 444 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 ARL1P40616 181 aaPredicted RBP7.25□□□□□ -1.25
LSAMP-207ENST00000539563 TBC1D8BQ0IIM8 1120 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CALCOCO2Q13137 446 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 TUBB8Q3ZCM7 444 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 FAM89AQ96GI7 184 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 TTF2Q9UNY4 1162 aaKnown RBP7.25□□□□□ -1.25
LSAMP-207ENST00000539563 UTP11Q9Y3A2 253 aaKnown RBP7.25□□□□□ -1.25
LSAMP-207ENST00000539563 SAMD9Q5K651 1589 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 H0YIN7 160 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 RXRAP19793 462 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 BRDTQ58F21 947 aaPredicted RBP7.25□□□□□ -1.25
LSAMP-207ENST00000539563 MSL1Q68DK7 614 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 NBPF11Q86T75 865 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 LZTFL1Q9NQ48 299 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 GJC1P36383 396 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 RAPGEF1Q13905 1077 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC122Q5T0U0 273 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 LIN9Q5TKA1 542 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 TRIM7Q9C029 511 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 RNF216Q9NWF9 866 aaPredicted RBP7.25□□□□□ -1.25
LSAMP-207ENST00000539563 XRCC6P12956 609 aaKnown RBP eCLIP7.25□□□□□ -1.25
LSAMP-207ENST00000539563 NLRP12P59046 1061 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CCDC121Q6ZUS5 278 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 UBL4BQ8N7F7 174 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CAPZA3Q96KX2 299 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CETN3O15182 167 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 ALDH1B1P30837 517 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 TAF12Q16514 161 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 KRT25Q7Z3Z0 450 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 TBC1D22AQ8WUA7 517 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 ARMT1Q9H993 441 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 KCNH3Q9ULD8 1083 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 SNX14Q9Y5W7 946 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 ARHGEF35A5YM69 484 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 PDE6BP35913 854 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CROCCP2Q86T23 111 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 IQCDQ96DY2 449 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 SWAP70Q9UH65 585 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 ANAPC4Q9UJX5 808 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 SYNRGQ9UMZ2 1314 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CHL1O00533 1208 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 GNA14O95837 355 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 PAK1Q13153 545 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 CALCRLQ16602 461 aa7.25□□□□□ -1.25
LSAMP-207ENST00000539563 SYNMO15061 1565 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 ERCC6LQ2NKX8 1250 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 TTC38Q5R3I4 469 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 CPLX4Q7Z7G2 160 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 IFT81Q8WYA0 676 aa7.24□□□□□ -1.25
LSAMP-207ENST00000539563 NUCKS1Q9H1E3 243 aaKnown RBP7.24□□□□□ -1.25
LSAMP-207ENST00000539563 CCNL1Q9UK58 526 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms