RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 A6NNZ2 444 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 GOLGA8FQ08AF8 430 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 GOLGA8DPQ0D2H9 430 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 KARSQ15046 597 aaKnown RBP20.29■□□□□ 0.84
TRA2A-211ENST00000538367 KIF4BQ2VIQ3 1234 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 TUBB8Q3ZCM7 444 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 NUTM2AQ8IVF1 878 aaPredicted RBP20.29■□□□□ 0.84
TRA2A-211ENST00000538367 GPATCH11Q8N954 259 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 LINS1Q8NG48 757 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 HELLSQ9NRZ9 838 aa20.29■□□□□ 0.84
TRA2A-211ENST00000538367 PUF60Q9UHX1 559 aaKnown RBP20.29■□□□□ 0.84
TRA2A-211ENST00000538367 APPP05067 770 aa20.28■□□□□ 0.84
TRA2A-211ENST00000538367 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
TRA2A-211ENST00000538367 SART3Q15020 963 aaKnown RBP20.28■□□□□ 0.84
TRA2A-211ENST00000538367 TRIML1Q8N9V2 468 aa20.28■□□□□ 0.84
TRA2A-211ENST00000538367 MLKLQ8NB16 471 aa20.28■□□□□ 0.84
TRA2A-211ENST00000538367 NAPGQ99747 312 aaPredicted RBP20.28■□□□□ 0.84
TRA2A-211ENST00000538367 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
TRA2A-211ENST00000538367 CCT2P78371 535 aaKnown RBP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 RESP18Q5W5W9 173 aa20.27■□□□□ 0.84
TRA2A-211ENST00000538367 GBP6Q6ZN66 633 aa20.27■□□□□ 0.84
TRA2A-211ENST00000538367 SEC62Q99442 399 aaKnown RBP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 LRRC2Q9BYS8 371 aa20.27■□□□□ 0.84
TRA2A-211ENST00000538367 PHRF1Q9P1Y6 1649 aaKnown RBP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 TARSL2A2RTX5 802 aaKnown RBP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 LRRIQ3A6PVS8 624 aaPredicted RBP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 SYF2O95926 243 aaKnown RBP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
TRA2A-211ENST00000538367 HAUS7Q99871 368 aa20.27■□□□□ 0.84
TRA2A-211ENST00000538367 OVOS2A0A0G2JMS6 1433 aa20.27■□□□□ 0.83
TRA2A-211ENST00000538367 CDHR2Q9BYE9 1310 aa20.27■□□□□ 0.83
TRA2A-211ENST00000538367 SPEF2Q9C093 1822 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 EBAG9O00559 213 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 KIF23Q02241 960 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-211ENST00000538367 CCDC102BQ68D86 513 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 CNPY4Q8N129 248 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 CCDC148Q8NFR7 591 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-211ENST00000538367 SUCLG2Q96I99 432 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 NHSL1Q5SYE7 1610 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 A0A1B0GTH6 734 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 ADKP55263 362 aaKnown RBP20.26■□□□□ 0.83
TRA2A-211ENST00000538367 SETQ01105 290 aaPredicted RBP20.26■□□□□ 0.83
TRA2A-211ENST00000538367 NR1I3Q14994 352 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 NT5DC1Q5TFE4 455 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 SPATS2Q86XZ4 545 aaKnown RBP20.26■□□□□ 0.83
TRA2A-211ENST00000538367 RPGRIP1Q96KN7 1286 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 DESI2Q9BSY9 194 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 ZSWIM4Q9H7M6 989 aa20.26■□□□□ 0.83
TRA2A-211ENST00000538367 NCOA5Q9HCD5 579 aaKnown RBP20.26■□□□□ 0.83
TRA2A-211ENST00000538367 EXOC5O00471 708 aa20.25■□□□□ 0.83
TRA2A-211ENST00000538367 HPCAL4Q9UM19 191 aa20.25■□□□□ 0.83
TRA2A-211ENST00000538367 ZNF569Q5MCW4 686 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 METTL16Q86W50 562 aaKnown RBP20.24■□□□□ 0.83
TRA2A-211ENST00000538367 KAZALD1Q96I82 304 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 SUGCTQ9HAC7 445 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.24■□□□□ 0.83
TRA2A-211ENST00000538367 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-211ENST00000538367 E7EWF7 191 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 GCP02774 474 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 HOXC9P31274 260 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 HNRNPH1P31943 449 aaKnown RBP20.24■□□□□ 0.83
TRA2A-211ENST00000538367 DDR1Q08345 913 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 PNOCQ13519 176 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 E2F4Q16254 413 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 TTLL5Q6EMB2 1281 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
TRA2A-211ENST00000538367 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
TRA2A-211ENST00000538367 C21orf2O43822 256 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 BANK1Q8NDB2 785 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 COPRSQ9NQ92 184 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 C4AP0C0L4 1744 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 C4BP0C0L5 1744 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 WDR19Q8NEZ3 1342 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 ZC3H4Q9UPT8 1303 aaKnown RBP20.23■□□□□ 0.83
TRA2A-211ENST00000538367 POLR3DP05423 398 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-211ENST00000538367 RHOXF2BP0C7M4 288 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 ERCC5P28715 1186 aaPredicted RBP20.23■□□□□ 0.83
TRA2A-211ENST00000538367 SHC4Q6S5L8 630 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 CNGA4Q8IV77 575 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 PRPF38AQ8NAV1 312 aaKnown RBP20.23■□□□□ 0.83
TRA2A-211ENST00000538367 FAM76AQ8TAV0 307 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 COG1Q8WTW3 980 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 RUBCNQ92622 972 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 RHOXF2Q9BQY4 288 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 LZTFL1Q9NQ48 299 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 NFE2L3Q9Y4A8 694 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 FAM169AQ9Y6X4 670 aa20.23■□□□□ 0.83
TRA2A-211ENST00000538367 ITIH6Q6UXX5 1313 aa20.22■□□□□ 0.83
TRA2A-211ENST00000538367 SOWAHDA6NJG2 315 aa20.22■□□□□ 0.83
TRA2A-211ENST00000538367 MNAT1P51948 309 aa20.22■□□□□ 0.83
TRA2A-211ENST00000538367 USP14P54578 494 aa20.22■□□□□ 0.83
TRA2A-211ENST00000538367 AMPD2Q01433 879 aa20.22■□□□□ 0.83
TRA2A-211ENST00000538367 PPFIA1Q13136 1202 aa20.22■□□□□ 0.83
TRA2A-211ENST00000538367 RAD9BQ6WBX8 426 aa20.22■□□□□ 0.83
TRA2A-211ENST00000538367 PPFIBP1Q86W92 1011 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms