RNA–Protein interactions for RNA: ENST00000537951.1

NPIPB4-208, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-208	ENST00000537951	PATL2	C9JE40	543 aa	Known RBP	12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	ADM5	C9JUS6	153 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	ENTPD3	O75355	529 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	PLCG2	P16885	1265 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	FMR1	Q06787	632 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	RASA3	Q14644	834 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	EAPP	Q56P03	285 aa	Predicted RBP	12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	FAM83A	Q86UY5	434 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	LDHD	Q86WU2	507 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	TMEM39B	Q9GZU3	492 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	DEFB129	Q9H1M3	183 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	VEZT	Q9HBM0	779 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	TACC3	Q9Y6A5	838 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	SLC4A4	Q9Y6R1	1079 aa		12.82	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CEP350	Q5VT06	3117 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	ITGBL1	O95965	494 aa	Predicted RBP	12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CYP2D6	P10635	497 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	TCP10	Q12799	353 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	ALX1	Q15699	326 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	PRAMEF18	Q5VWM3	479 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	MAP1S	Q66K74	1059 aa	Predicted RBP	12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CERS3	Q8IU89	383 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	FAM151A	Q8WW52	585 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	NBPF3	Q9H094	633 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	ATP8A2	Q9NTI2	1148 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	SIPA1L1	O43166	1804 aa		12.81	□□□□□ -0.36
NPIPB4-208	ENST00000537951	PCNT	O95613	3336 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	COL2A1	P02458	1487 aa	Predicted RBP	12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CYP2D7	A0A087X1C5	515 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	MYO1B	O43795	1136 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	FGA	P02671	866 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	PLCD1	P51178	756 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	MAP3K10	Q02779	954 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	PICALM	Q13492	652 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	GIMAP6	Q6P9H5	292 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CTR9	Q6PD62	1173 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	USP48	Q86UV5	1035 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	METTL16	Q86W50	562 aa	Known RBP	12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	IFNL3	Q8IZI9	196 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	MAP4K1	Q92918	833 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	PALD1	Q9ULE6	856 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	TAF6L	Q9Y6J9	622 aa		12.8	□□□□□ -0.36
NPIPB4-208	ENST00000537951	TRAF5	O00463	557 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	GNAT2	P19087	354 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	GABPA	Q06546	454 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	SBK1	Q52WX2	424 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	KRT26	Q7Z3Y9	468 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	NKX2-3	Q8TAU0	364 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	RUFY2	Q8WXA3	655 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	NOL10	Q9BSC4	688 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	DSCC1	Q9BVC3	393 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	DNAJC18	Q9H819	358 aa		12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	SAP30BP	Q9UHR5	308 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB4-208	ENST00000537951	USP17L12	C9JPN9	530 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	USP17L21	D6R901	530 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	USP5	P45974	858 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	RRP1B	Q14684	758 aa	Known RBP	12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	C12orf60	Q5U649	245 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CHADL	Q6NUI6	762 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CDC37L1	Q7L3B6	337 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	DCPS	Q96C86	337 aa	Known RBP	12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	CLEC11A	Q9Y240	323 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	ZMYM6	O95789	1325 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	PASK	Q96RG2	1323 aa		12.78	□□□□□ -0.36
NPIPB4-208	ENST00000537951	NAV1	Q8NEY1	1877 aa		12.77	□□□□□ -0.36
NPIPB4-208	ENST00000537951	COL9A3	Q14050	684 aa	Predicted RBP	12.77	□□□□□ -0.37
NPIPB4-208	ENST00000537951	NECTIN1	Q15223	517 aa		12.77	□□□□□ -0.37
NPIPB4-208	ENST00000537951	SLC4A8	Q2Y0W8	1093 aa		12.77	□□□□□ -0.37
NPIPB4-208	ENST00000537951	CDCA5	Q96FF9	252 aa		12.77	□□□□□ -0.37
NPIPB4-208	ENST00000537951	INCENP	Q9NQS7	918 aa		12.77	□□□□□ -0.37
NPIPB4-208	ENST00000537951	MCM9	Q9NXL9	1143 aa		12.77	□□□□□ -0.37
NPIPB4-208	ENST00000537951	PPP2R3B	Q9Y5P8	575 aa		12.77	□□□□□ -0.37
NPIPB4-208	ENST00000537951	TNFAIP1	Q13829	316 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	SULF1	Q8IWU6	871 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	RBM46	Q8TBY0	533 aa	Known RBP	12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	KCNB2	Q92953	911 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	DYNLL2	Q96FJ2	89 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	USP26	Q9BXU7	913 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	BACH2	Q9BYV9	841 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	TMOD2	Q9NZR1	351 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	FZD1	Q9UP38	647 aa		12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	RBM8A	Q9Y5S9	174 aa	Known RBP	12.76	□□□□□ -0.37
NPIPB4-208	ENST00000537951	MYH1	P12882	1939 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	ROBO3	Q96MS0	1386 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	PHF20L1	A8MW92	1017 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	TOMM70	O94826	608 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	APP	P05067	770 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	CYP21A2	P08686	494 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	FGR	P09769	529 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	MFAP1	P55081	439 aa	Known RBP	12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	JAG1	P78504	1218 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	CST9	Q5W186	159 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	TBC1D10C	Q8IV04	446 aa		12.75	□□□□□ -0.37
NPIPB4-208	ENST00000537951	SLC44A5	Q8NCS7	719 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms